Gene : Bradi3g01600 B. distachyon v3.1
Defline:  (1 of 2) PTHR11722 - 60S RIBOSOMAL PROTEIN L13 Genomic Order:  170
Name:  ? Bradi3g01600 Secondary Identifier:  ? PAC:32813341
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g01600 0.5kb upstream 0.5kb upstream 2760 true Bd3: 1006466-1009225 Brachypodium distachyon
Bradi3g01600 0.5kb upstream 0.5kb upstream 500 false Bd3: 1008726-1009225 Brachypodium distachyon
Bradi3g01600 0.5kb downstream 0.5kb downstream 2760 true Bd3: 1005966-1008725 Brachypodium distachyon
Bradi3g01600 0.5kb downstream 0.5kb downstream 500 false Bd3: 1005966-1006465 Brachypodium distachyon
Bradi3g01600 1.0kb upstream 1.0kb upstream 3260 true Bd3: 1006466-1009725 Brachypodium distachyon
Bradi3g01600 1.0kb upstream 1.0kb upstream 1000 false Bd3: 1008726-1009725 Brachypodium distachyon
Bradi3g01600 1.0kb downstream 1.0kb downstream 3260 true Bd3: 1005466-1008725 Brachypodium distachyon
Bradi3g01600 1.0kb downstream 1.0kb downstream 1000 false Bd3: 1005466-1006465 Brachypodium distachyon
Bradi3g01600 2.0kb upstream 2.0kb upstream 4260 true Bd3: 1006466-1010725 Brachypodium distachyon
Bradi3g01600 2.0kb upstream 2.0kb upstream 2000 false Bd3: 1008726-1010725 Brachypodium distachyon
Bradi3g01600 2.0kb downstream 2.0kb downstream 4260 true Bd3: 1004466-1008725 Brachypodium distachyon
Bradi3g01600 2.0kb downstream 2.0kb downstream 2000 false Bd3: 1004466-1006465 Brachypodium distachyon
Bradi3g01600 5.0kb upstream 5.0kb upstream 7260 true Bd3: 1006466-1013725 Brachypodium distachyon
Bradi3g01600 5.0kb upstream 5.0kb upstream 5000 false Bd3: 1008726-1013725 Brachypodium distachyon
Bradi3g01600 5.0kb downstream 5.0kb downstream 7260 true Bd3: 1001466-1008725 Brachypodium distachyon
Bradi3g01600 5.0kb downstream 5.0kb downstream 5000 false Bd3: 1001466-1006465 Brachypodium distachyon
Bradi3g01600 10.0kb upstream 10.0kb upstream 12260 true Bd3: 1006466-1018725 Brachypodium distachyon
Bradi3g01600 10.0kb upstream 10.0kb upstream 10000 false Bd3: 1008726-1018725 Brachypodium distachyon
Bradi3g01600 10.0kb downstream 10.0kb downstream 12260 true Bd3: 996466-1008725 Brachypodium distachyon
Bradi3g01600 10.0kb downstream 10.0kb downstream 10000 false Bd3: 996466-1006465 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570467 5269 Grass View MSA
122049765 5273 Angiosperm View MSA
121344371 5274 Embryophyte View MSA
123426358 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 77.244     High  
cufflinks 91.172     High  
cufflinks 75.489     High  
cufflinks 81.875     High  
cufflinks 54.21     High  
cufflinks 79.908     High  
cufflinks 89.421     High  
cufflinks 72.357     High  
cufflinks 76.468     High  
cufflinks 71.391     High  
cufflinks 22.141     High Low
cufflinks 65.636     High  
cufflinks 13.869     High Low
cufflinks 19.302     High Low
cufflinks 33.872     High  
cufflinks 94.358     High  
cufflinks 95.147     High  
cufflinks 158.092     High High
cufflinks 91.821     High  
cufflinks 20.354     High Low
cufflinks 93.273     High  
cufflinks 53.306     High  
cufflinks 57.866     High  
cufflinks 59.347     High  
cufflinks 86.048     High  
cufflinks 64.025     High  
cufflinks 16.657     High Low
cufflinks 61.706     High  
cufflinks 59.454     High  
cufflinks 97.715     High  

0 Strain