Gene : Bradi3g01630 B. distachyon v3.1
Defline:  (1 of 1) PTHR10516:SF319 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC Genomic Order:  173
Name:  ? Bradi3g01630 Secondary Identifier:  ? PAC:32818945
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g01630 0.5kb upstream 0.5kb upstream 5247 true Bd3: 1023891-1029137 Brachypodium distachyon
Bradi3g01630 0.5kb upstream 0.5kb upstream 500 false Bd3: 1023891-1024390 Brachypodium distachyon
Bradi3g01630 0.5kb downstream 0.5kb downstream 5247 true Bd3: 1024391-1029637 Brachypodium distachyon
Bradi3g01630 0.5kb downstream 0.5kb downstream 500 false Bd3: 1029138-1029637 Brachypodium distachyon
Bradi3g01630 1.0kb upstream 1.0kb upstream 5747 true Bd3: 1023391-1029137 Brachypodium distachyon
Bradi3g01630 1.0kb upstream 1.0kb upstream 1000 false Bd3: 1023391-1024390 Brachypodium distachyon
Bradi3g01630 1.0kb downstream 1.0kb downstream 5747 true Bd3: 1024391-1030137 Brachypodium distachyon
Bradi3g01630 1.0kb downstream 1.0kb downstream 1000 false Bd3: 1029138-1030137 Brachypodium distachyon
Bradi3g01630 2.0kb upstream 2.0kb upstream 6747 true Bd3: 1022391-1029137 Brachypodium distachyon
Bradi3g01630 2.0kb upstream 2.0kb upstream 2000 false Bd3: 1022391-1024390 Brachypodium distachyon
Bradi3g01630 2.0kb downstream 2.0kb downstream 6747 true Bd3: 1024391-1031137 Brachypodium distachyon
Bradi3g01630 2.0kb downstream 2.0kb downstream 2000 false Bd3: 1029138-1031137 Brachypodium distachyon
Bradi3g01630 5.0kb upstream 5.0kb upstream 9747 true Bd3: 1019391-1029137 Brachypodium distachyon
Bradi3g01630 5.0kb upstream 5.0kb upstream 5000 false Bd3: 1019391-1024390 Brachypodium distachyon
Bradi3g01630 5.0kb downstream 5.0kb downstream 9747 true Bd3: 1024391-1034137 Brachypodium distachyon
Bradi3g01630 5.0kb downstream 5.0kb downstream 5000 false Bd3: 1029138-1034137 Brachypodium distachyon
Bradi3g01630 10.0kb upstream 10.0kb upstream 14747 true Bd3: 1014391-1029137 Brachypodium distachyon
Bradi3g01630 10.0kb upstream 10.0kb upstream 10000 false Bd3: 1014391-1024390 Brachypodium distachyon
Bradi3g01630 10.0kb downstream 10.0kb downstream 14747 true Bd3: 1024391-1039137 Brachypodium distachyon
Bradi3g01630 10.0kb downstream 10.0kb downstream 10000 false Bd3: 1029138-1039137 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573789 5269 Grass View MSA
122046491 5273 Angiosperm View MSA
121345976 5274 Embryophyte View MSA
123426566 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.474        
cufflinks 7.002        
cufflinks 8.082        
cufflinks 9.885       High
cufflinks 5.081        
cufflinks 5.308        
cufflinks 5.864        
cufflinks 5.369        
cufflinks 5.142        
cufflinks 8.951        
cufflinks 5.008        
cufflinks 4.834        
cufflinks 6.539        
cufflinks 6.014        
cufflinks 7.754        
cufflinks 5.71        
cufflinks 6.38        
cufflinks 0.775       Low
cufflinks 2.934        
cufflinks 1.349       Low
cufflinks 2.714        
cufflinks 6.123        
cufflinks 5.635        
cufflinks 5.649        
cufflinks 6.353        
cufflinks 11.431     High High
cufflinks 5.017        
cufflinks 9.104        
cufflinks 8.319        
cufflinks 3.338        

0 Strain