Gene : Bradi3g01650 B. distachyon v3.1
Defline:  (1 of 1) PTHR13040 - AUTOPHAGY PROTEIN 5 Genomic Order:  175
Name:  ? Bradi3g01650 Secondary Identifier:  ? PAC:32815981
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g01650 0.5kb upstream 0.5kb upstream 4188 true Bd3: 1030484-1034671 Brachypodium distachyon
Bradi3g01650 0.5kb upstream 0.5kb upstream 500 false Bd3: 1034172-1034671 Brachypodium distachyon
Bradi3g01650 0.5kb downstream 0.5kb downstream 4188 true Bd3: 1029984-1034171 Brachypodium distachyon
Bradi3g01650 0.5kb downstream 0.5kb downstream 500 false Bd3: 1029984-1030483 Brachypodium distachyon
Bradi3g01650 1.0kb upstream 1.0kb upstream 4688 true Bd3: 1030484-1035171 Brachypodium distachyon
Bradi3g01650 1.0kb upstream 1.0kb upstream 1000 false Bd3: 1034172-1035171 Brachypodium distachyon
Bradi3g01650 1.0kb downstream 1.0kb downstream 4688 true Bd3: 1029484-1034171 Brachypodium distachyon
Bradi3g01650 1.0kb downstream 1.0kb downstream 1000 false Bd3: 1029484-1030483 Brachypodium distachyon
Bradi3g01650 2.0kb upstream 2.0kb upstream 5688 true Bd3: 1030484-1036171 Brachypodium distachyon
Bradi3g01650 2.0kb upstream 2.0kb upstream 2000 false Bd3: 1034172-1036171 Brachypodium distachyon
Bradi3g01650 2.0kb downstream 2.0kb downstream 5688 true Bd3: 1028484-1034171 Brachypodium distachyon
Bradi3g01650 2.0kb downstream 2.0kb downstream 2000 false Bd3: 1028484-1030483 Brachypodium distachyon
Bradi3g01650 5.0kb upstream 5.0kb upstream 8688 true Bd3: 1030484-1039171 Brachypodium distachyon
Bradi3g01650 5.0kb upstream 5.0kb upstream 5000 false Bd3: 1034172-1039171 Brachypodium distachyon
Bradi3g01650 5.0kb downstream 5.0kb downstream 8688 true Bd3: 1025484-1034171 Brachypodium distachyon
Bradi3g01650 5.0kb downstream 5.0kb downstream 5000 false Bd3: 1025484-1030483 Brachypodium distachyon
Bradi3g01650 10.0kb upstream 10.0kb upstream 13688 true Bd3: 1030484-1044171 Brachypodium distachyon
Bradi3g01650 10.0kb upstream 10.0kb upstream 10000 false Bd3: 1034172-1044171 Brachypodium distachyon
Bradi3g01650 10.0kb downstream 10.0kb downstream 13688 true Bd3: 1020484-1034171 Brachypodium distachyon
Bradi3g01650 10.0kb downstream 10.0kb downstream 10000 false Bd3: 1020484-1030483 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569807 5269 Grass View MSA
122043492 5273 Angiosperm View MSA
121349357 5274 Embryophyte View MSA
123424338 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.95        
cufflinks 2.003        
cufflinks 2.174        
cufflinks 1.775        
cufflinks 2.012        
cufflinks 2.074        
cufflinks 1.888        
cufflinks 1.918        
cufflinks 2.112        
cufflinks 1.941        
cufflinks 2.199        
cufflinks 1.696        
cufflinks 1.606        
cufflinks 1.84        
cufflinks 1.719        
cufflinks 2.341        
cufflinks 2.694        
cufflinks 3.435       High
cufflinks 3.659       High
cufflinks 1.118       Low
cufflinks 3.212       High
cufflinks 2.306        
cufflinks 2.055        
cufflinks 1.843        
cufflinks 1.989        
cufflinks 2.086        
cufflinks 1.949        
cufflinks 1.798        
cufflinks 2.064        
cufflinks 2.409        

0 Strain