Gene : Bradi4g28130 B. distachyon v3.1
Defline:  (1 of 16) KOG0087 - GTPase Rab11/YPT3, small G protein superfamily Genomic Order:  3587
Name:  ? Bradi4g28130 Secondary Identifier:  ? PAC:32786649
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g28130 0.5kb upstream 0.5kb upstream 2937 true Bd4: 33364591-33367527 Brachypodium distachyon
Bradi4g28130 0.5kb upstream 0.5kb upstream 500 false Bd4: 33367028-33367527 Brachypodium distachyon
Bradi4g28130 0.5kb downstream 0.5kb downstream 2937 true Bd4: 33364091-33367027 Brachypodium distachyon
Bradi4g28130 0.5kb downstream 0.5kb downstream 500 false Bd4: 33364091-33364590 Brachypodium distachyon
Bradi4g28130 1.0kb upstream 1.0kb upstream 3437 true Bd4: 33364591-33368027 Brachypodium distachyon
Bradi4g28130 1.0kb upstream 1.0kb upstream 1000 false Bd4: 33367028-33368027 Brachypodium distachyon
Bradi4g28130 1.0kb downstream 1.0kb downstream 3437 true Bd4: 33363591-33367027 Brachypodium distachyon
Bradi4g28130 1.0kb downstream 1.0kb downstream 1000 false Bd4: 33363591-33364590 Brachypodium distachyon
Bradi4g28130 2.0kb upstream 2.0kb upstream 4437 true Bd4: 33364591-33369027 Brachypodium distachyon
Bradi4g28130 2.0kb upstream 2.0kb upstream 2000 false Bd4: 33367028-33369027 Brachypodium distachyon
Bradi4g28130 2.0kb downstream 2.0kb downstream 4437 true Bd4: 33362591-33367027 Brachypodium distachyon
Bradi4g28130 2.0kb downstream 2.0kb downstream 2000 false Bd4: 33362591-33364590 Brachypodium distachyon
Bradi4g28130 5.0kb upstream 5.0kb upstream 7437 true Bd4: 33364591-33372027 Brachypodium distachyon
Bradi4g28130 5.0kb upstream 5.0kb upstream 5000 false Bd4: 33367028-33372027 Brachypodium distachyon
Bradi4g28130 5.0kb downstream 5.0kb downstream 7437 true Bd4: 33359591-33367027 Brachypodium distachyon
Bradi4g28130 5.0kb downstream 5.0kb downstream 5000 false Bd4: 33359591-33364590 Brachypodium distachyon
Bradi4g28130 10.0kb upstream 10.0kb upstream 12437 true Bd4: 33364591-33377027 Brachypodium distachyon
Bradi4g28130 10.0kb upstream 10.0kb upstream 10000 false Bd4: 33367028-33377027 Brachypodium distachyon
Bradi4g28130 10.0kb downstream 10.0kb downstream 12437 true Bd4: 33354591-33367027 Brachypodium distachyon
Bradi4g28130 10.0kb downstream 10.0kb downstream 10000 false Bd4: 33354591-33364590 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587924 5269 Grass View MSA
122042184 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.553     High  
cufflinks 10.346     High  
cufflinks 9.471        
cufflinks 11.376     High  
cufflinks 11.297     High  
cufflinks 8.84        
cufflinks 8.219        
cufflinks 10.314     High  
cufflinks 8.385        
cufflinks 9.647        
cufflinks 4.14       Low
cufflinks 8.423        
cufflinks 3.416       Low
cufflinks 3.957       Low
cufflinks 8.714     High  
cufflinks 9.129        
cufflinks 12.345     High  
cufflinks 20.071     High High
cufflinks 13.999     High  
cufflinks 10.264        
cufflinks 20.853     High High
cufflinks 8.769        
cufflinks 10.489     High  
cufflinks 9.66     High  
cufflinks 9.124        
cufflinks 10.331        
cufflinks 5.219       Low
cufflinks 10.481        
cufflinks 9.585        
cufflinks 17.418     High High

0 Strain