Gene : Bradi3g02997 B. distachyon v3.1
Defline:  (1 of 399) PF01535 - PPR repeat (PPR) Genomic Order:  348
Name:  ? Bradi3g02997 Secondary Identifier:  ? PAC:32821608
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g02997 0.5kb upstream 0.5kb upstream 9156 true Bd3: 1922822-1931977 Brachypodium distachyon
Bradi3g02997 0.5kb upstream 0.5kb upstream 500 false Bd3: 1931478-1931977 Brachypodium distachyon
Bradi3g02997 0.5kb downstream 0.5kb downstream 9156 true Bd3: 1922322-1931477 Brachypodium distachyon
Bradi3g02997 0.5kb downstream 0.5kb downstream 500 false Bd3: 1922322-1922821 Brachypodium distachyon
Bradi3g02997 1.0kb upstream 1.0kb upstream 9656 true Bd3: 1922822-1932477 Brachypodium distachyon
Bradi3g02997 1.0kb upstream 1.0kb upstream 1000 false Bd3: 1931478-1932477 Brachypodium distachyon
Bradi3g02997 1.0kb downstream 1.0kb downstream 9656 true Bd3: 1921822-1931477 Brachypodium distachyon
Bradi3g02997 1.0kb downstream 1.0kb downstream 1000 false Bd3: 1921822-1922821 Brachypodium distachyon
Bradi3g02997 2.0kb upstream 2.0kb upstream 10656 true Bd3: 1922822-1933477 Brachypodium distachyon
Bradi3g02997 2.0kb upstream 2.0kb upstream 2000 false Bd3: 1931478-1933477 Brachypodium distachyon
Bradi3g02997 2.0kb downstream 2.0kb downstream 10656 true Bd3: 1920822-1931477 Brachypodium distachyon
Bradi3g02997 2.0kb downstream 2.0kb downstream 2000 false Bd3: 1920822-1922821 Brachypodium distachyon
Bradi3g02997 5.0kb upstream 5.0kb upstream 13656 true Bd3: 1922822-1936477 Brachypodium distachyon
Bradi3g02997 5.0kb upstream 5.0kb upstream 5000 false Bd3: 1931478-1936477 Brachypodium distachyon
Bradi3g02997 5.0kb downstream 5.0kb downstream 13656 true Bd3: 1917822-1931477 Brachypodium distachyon
Bradi3g02997 5.0kb downstream 5.0kb downstream 5000 false Bd3: 1917822-1922821 Brachypodium distachyon
Bradi3g02997 10.0kb upstream 10.0kb upstream 18656 true Bd3: 1922822-1941477 Brachypodium distachyon
Bradi3g02997 10.0kb upstream 10.0kb upstream 10000 false Bd3: 1931478-1941477 Brachypodium distachyon
Bradi3g02997 10.0kb downstream 10.0kb downstream 18656 true Bd3: 1912822-1931477 Brachypodium distachyon
Bradi3g02997 10.0kb downstream 10.0kb downstream 10000 false Bd3: 1912822-1922821 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579395 5269 Grass View MSA
122045808 5273 Angiosperm View MSA
121347981 5274 Embryophyte View MSA
123380700 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.166        
cufflinks 1.688        
cufflinks 2.43       High
cufflinks 1.518        
cufflinks 0.603       Low
cufflinks 1.344        
cufflinks 1.406        
cufflinks 1.196        
cufflinks 1.505        
cufflinks 1.326        
cufflinks 1.048        
cufflinks 1.328        
cufflinks 0.795        
cufflinks 0.664        
cufflinks 0.817        
cufflinks 1.675        
cufflinks 0.815        
cufflinks 2.743       High
cufflinks 0.914        
cufflinks 0.201       Low
cufflinks 0.884        
cufflinks 2.119       High
cufflinks 1.089        
cufflinks 1.075        
cufflinks 1.25        
cufflinks 2.225       High
cufflinks 0.736        
cufflinks 2.207       High
cufflinks 1.777        
cufflinks 1.451        

0 Strain