Gene : Bradi3g03090 B. distachyon v3.1
Defline:  (1 of 1) PTHR11615//PTHR11615:SF147 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  356
Name:  ? Bradi3g03090 Secondary Identifier:  ? PAC:32819088
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g03090 0.5kb upstream 0.5kb upstream 3418 true Bd3: 1976879-1980296 Brachypodium distachyon
Bradi3g03090 0.5kb upstream 0.5kb upstream 500 false Bd3: 1979797-1980296 Brachypodium distachyon
Bradi3g03090 0.5kb downstream 0.5kb downstream 3418 true Bd3: 1976379-1979796 Brachypodium distachyon
Bradi3g03090 0.5kb downstream 0.5kb downstream 500 false Bd3: 1976379-1976878 Brachypodium distachyon
Bradi3g03090 1.0kb upstream 1.0kb upstream 3918 true Bd3: 1976879-1980796 Brachypodium distachyon
Bradi3g03090 1.0kb upstream 1.0kb upstream 1000 false Bd3: 1979797-1980796 Brachypodium distachyon
Bradi3g03090 1.0kb downstream 1.0kb downstream 3918 true Bd3: 1975879-1979796 Brachypodium distachyon
Bradi3g03090 1.0kb downstream 1.0kb downstream 1000 false Bd3: 1975879-1976878 Brachypodium distachyon
Bradi3g03090 2.0kb upstream 2.0kb upstream 4918 true Bd3: 1976879-1981796 Brachypodium distachyon
Bradi3g03090 2.0kb upstream 2.0kb upstream 2000 false Bd3: 1979797-1981796 Brachypodium distachyon
Bradi3g03090 2.0kb downstream 2.0kb downstream 4918 true Bd3: 1974879-1979796 Brachypodium distachyon
Bradi3g03090 2.0kb downstream 2.0kb downstream 2000 false Bd3: 1974879-1976878 Brachypodium distachyon
Bradi3g03090 5.0kb upstream 5.0kb upstream 7918 true Bd3: 1976879-1984796 Brachypodium distachyon
Bradi3g03090 5.0kb upstream 5.0kb upstream 5000 false Bd3: 1979797-1984796 Brachypodium distachyon
Bradi3g03090 5.0kb downstream 5.0kb downstream 7918 true Bd3: 1971879-1979796 Brachypodium distachyon
Bradi3g03090 5.0kb downstream 5.0kb downstream 5000 false Bd3: 1971879-1976878 Brachypodium distachyon
Bradi3g03090 10.0kb upstream 10.0kb upstream 12918 true Bd3: 1976879-1989796 Brachypodium distachyon
Bradi3g03090 10.0kb upstream 10.0kb upstream 10000 false Bd3: 1979797-1989796 Brachypodium distachyon
Bradi3g03090 10.0kb downstream 10.0kb downstream 12918 true Bd3: 1966879-1979796 Brachypodium distachyon
Bradi3g03090 10.0kb downstream 10.0kb downstream 10000 false Bd3: 1966879-1976878 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582220 5269 Grass View MSA
122047644 5273 Angiosperm View MSA
121351377 5274 Embryophyte View MSA
123382143 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.925        
cufflinks 0.913        
cufflinks 0.852        
cufflinks 0.987        
cufflinks 0.825        
cufflinks 0.6        
cufflinks 0.853        
cufflinks 0.755        
cufflinks 0.674        
cufflinks 0.975        
cufflinks 0.694        
cufflinks 0.51       Low
cufflinks 0.53       Low
cufflinks 0.585        
cufflinks 0.578       Low
cufflinks 0.706        
cufflinks 0.93        
cufflinks 1.2       High
cufflinks 1.469       High
cufflinks 0.608        
cufflinks 2.432       High
cufflinks 0.629        
cufflinks 0.857        
cufflinks 0.735        
cufflinks 0.74        
cufflinks 0.975        
cufflinks 0.702        
cufflinks 1.016        
cufflinks 0.882        
cufflinks 1.467       High

0 Strain