Gene : Bradi3g07877 B. distachyon v3.1
Defline:  (1 of 1) PTHR11477//PTHR11477:SF8 - TRANSCRIPTION ELONGATION FACTOR S-II Genomic Order:  997
Name:  ? Bradi3g07877 Secondary Identifier:  ? PAC:32820530
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g07877 0.5kb upstream 0.5kb upstream 6973 true Bd3: 6045555-6052527 Brachypodium distachyon
Bradi3g07877 0.5kb upstream 0.5kb upstream 500 false Bd3: 6045555-6046054 Brachypodium distachyon
Bradi3g07877 0.5kb downstream 0.5kb downstream 6973 true Bd3: 6046055-6053027 Brachypodium distachyon
Bradi3g07877 0.5kb downstream 0.5kb downstream 500 false Bd3: 6052528-6053027 Brachypodium distachyon
Bradi3g07877 1.0kb upstream 1.0kb upstream 7473 true Bd3: 6045055-6052527 Brachypodium distachyon
Bradi3g07877 1.0kb upstream 1.0kb upstream 1000 false Bd3: 6045055-6046054 Brachypodium distachyon
Bradi3g07877 1.0kb downstream 1.0kb downstream 7473 true Bd3: 6046055-6053527 Brachypodium distachyon
Bradi3g07877 1.0kb downstream 1.0kb downstream 1000 false Bd3: 6052528-6053527 Brachypodium distachyon
Bradi3g07877 2.0kb upstream 2.0kb upstream 8473 true Bd3: 6044055-6052527 Brachypodium distachyon
Bradi3g07877 2.0kb upstream 2.0kb upstream 2000 false Bd3: 6044055-6046054 Brachypodium distachyon
Bradi3g07877 2.0kb downstream 2.0kb downstream 8473 true Bd3: 6046055-6054527 Brachypodium distachyon
Bradi3g07877 2.0kb downstream 2.0kb downstream 2000 false Bd3: 6052528-6054527 Brachypodium distachyon
Bradi3g07877 5.0kb upstream 5.0kb upstream 11473 true Bd3: 6041055-6052527 Brachypodium distachyon
Bradi3g07877 5.0kb upstream 5.0kb upstream 5000 false Bd3: 6041055-6046054 Brachypodium distachyon
Bradi3g07877 5.0kb downstream 5.0kb downstream 11473 true Bd3: 6046055-6057527 Brachypodium distachyon
Bradi3g07877 5.0kb downstream 5.0kb downstream 5000 false Bd3: 6052528-6057527 Brachypodium distachyon
Bradi3g07877 10.0kb upstream 10.0kb upstream 16473 true Bd3: 6036055-6052527 Brachypodium distachyon
Bradi3g07877 10.0kb upstream 10.0kb upstream 10000 false Bd3: 6036055-6046054 Brachypodium distachyon
Bradi3g07877 10.0kb downstream 10.0kb downstream 16473 true Bd3: 6046055-6062527 Brachypodium distachyon
Bradi3g07877 10.0kb downstream 10.0kb downstream 10000 false Bd3: 6052528-6062527 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571254 5269 Grass View MSA
122051575 5273 Angiosperm View MSA
121345447 5274 Embryophyte View MSA
123423935 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.467        
cufflinks 2.919        
cufflinks 3.127        
cufflinks 2.068        
cufflinks 0.834       Low
cufflinks 2.598        
cufflinks 2.492        
cufflinks 2.002        
cufflinks 2.339        
cufflinks 1.301        
cufflinks 3.742       High
cufflinks 2.943        
cufflinks 2.631        
cufflinks 2.279        
cufflinks 1.534        
cufflinks 3.001        
cufflinks 1.105        
cufflinks 2.532        
cufflinks 1.48        
cufflinks 0.59       Low
cufflinks 1.163        
cufflinks 3.035        
cufflinks 1.938        
cufflinks 2.057        
cufflinks 1.862        
cufflinks 2.371        
cufflinks 2.451        
cufflinks 2.253        
cufflinks 2.322        
cufflinks 2.645        

0 Strain