Gene : Bradi4g43322 B. distachyon v3.1
Defline:  (1 of 4) PTHR23334 - CCAAT/ENHANCER BINDING PROTEIN Genomic Order:  5589
Name:  ? Bradi4g43322 Secondary Identifier:  ? PAC:32788541
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g43322 0.5kb upstream 0.5kb upstream 4268 true Bd4: 46998603-47002870 Brachypodium distachyon
Bradi4g43322 0.5kb upstream 0.5kb upstream 500 false Bd4: 47002371-47002870 Brachypodium distachyon
Bradi4g43322 0.5kb downstream 0.5kb downstream 4268 true Bd4: 46998103-47002370 Brachypodium distachyon
Bradi4g43322 0.5kb downstream 0.5kb downstream 500 false Bd4: 46998103-46998602 Brachypodium distachyon
Bradi4g43322 1.0kb upstream 1.0kb upstream 4768 true Bd4: 46998603-47003370 Brachypodium distachyon
Bradi4g43322 1.0kb upstream 1.0kb upstream 1000 false Bd4: 47002371-47003370 Brachypodium distachyon
Bradi4g43322 1.0kb downstream 1.0kb downstream 4768 true Bd4: 46997603-47002370 Brachypodium distachyon
Bradi4g43322 1.0kb downstream 1.0kb downstream 1000 false Bd4: 46997603-46998602 Brachypodium distachyon
Bradi4g43322 2.0kb upstream 2.0kb upstream 5768 true Bd4: 46998603-47004370 Brachypodium distachyon
Bradi4g43322 2.0kb upstream 2.0kb upstream 2000 false Bd4: 47002371-47004370 Brachypodium distachyon
Bradi4g43322 2.0kb downstream 2.0kb downstream 5768 true Bd4: 46996603-47002370 Brachypodium distachyon
Bradi4g43322 2.0kb downstream 2.0kb downstream 2000 false Bd4: 46996603-46998602 Brachypodium distachyon
Bradi4g43322 5.0kb upstream 5.0kb upstream 8768 true Bd4: 46998603-47007370 Brachypodium distachyon
Bradi4g43322 5.0kb upstream 5.0kb upstream 5000 false Bd4: 47002371-47007370 Brachypodium distachyon
Bradi4g43322 5.0kb downstream 5.0kb downstream 8768 true Bd4: 46993603-47002370 Brachypodium distachyon
Bradi4g43322 5.0kb downstream 5.0kb downstream 5000 false Bd4: 46993603-46998602 Brachypodium distachyon
Bradi4g43322 10.0kb upstream 10.0kb upstream 13768 true Bd4: 46998603-47012370 Brachypodium distachyon
Bradi4g43322 10.0kb upstream 10.0kb upstream 10000 false Bd4: 47002371-47012370 Brachypodium distachyon
Bradi4g43322 10.0kb downstream 10.0kb downstream 13768 true Bd4: 46988603-47002370 Brachypodium distachyon
Bradi4g43322 10.0kb downstream 10.0kb downstream 10000 false Bd4: 46988603-46998602 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568125 5269 Grass View MSA
122050154 5273 Angiosperm View MSA
121349674 5274 Embryophyte View MSA
123381395 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.737       Low
cufflinks 1.188       Low
cufflinks 1.758        
cufflinks 1.377        
cufflinks 2.388        
cufflinks 1.553        
cufflinks 1.427        
cufflinks 1.695        
cufflinks 1.793        
cufflinks 3.467       High
cufflinks 3.867       High
cufflinks 1.468        
cufflinks 2.593        
cufflinks 3.103       High
cufflinks 1.349        
cufflinks 1.335        
cufflinks 1.472        
cufflinks 1.596        
cufflinks 1.886        
cufflinks 3.526       High
cufflinks 2.569        
cufflinks 2.8        
cufflinks 2.017        
cufflinks 1.654        
cufflinks 1.675        
cufflinks 2.04        
cufflinks 2.625        
cufflinks 3.056       High
cufflinks 3.12       High
cufflinks 1.474        

0 Strain