Gene : Bradi3g08210 B. distachyon v3.1
Defline:  (1 of 1) PTHR11615//PTHR11615:SF143 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  1046
Name:  ? Bradi3g08210 Secondary Identifier:  ? PAC:32822076
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g08210 0.5kb upstream 0.5kb upstream 1924 true Bd3: 6405250-6407173 Brachypodium distachyon
Bradi3g08210 0.5kb upstream 0.5kb upstream 500 false Bd3: 6406674-6407173 Brachypodium distachyon
Bradi3g08210 0.5kb downstream 0.5kb downstream 1924 true Bd3: 6404750-6406673 Brachypodium distachyon
Bradi3g08210 0.5kb downstream 0.5kb downstream 500 false Bd3: 6404750-6405249 Brachypodium distachyon
Bradi3g08210 1.0kb upstream 1.0kb upstream 2424 true Bd3: 6405250-6407673 Brachypodium distachyon
Bradi3g08210 1.0kb upstream 1.0kb upstream 1000 false Bd3: 6406674-6407673 Brachypodium distachyon
Bradi3g08210 1.0kb downstream 1.0kb downstream 2424 true Bd3: 6404250-6406673 Brachypodium distachyon
Bradi3g08210 1.0kb downstream 1.0kb downstream 1000 false Bd3: 6404250-6405249 Brachypodium distachyon
Bradi3g08210 2.0kb upstream 2.0kb upstream 3424 true Bd3: 6405250-6408673 Brachypodium distachyon
Bradi3g08210 2.0kb upstream 2.0kb upstream 2000 false Bd3: 6406674-6408673 Brachypodium distachyon
Bradi3g08210 2.0kb downstream 2.0kb downstream 3424 true Bd3: 6403250-6406673 Brachypodium distachyon
Bradi3g08210 2.0kb downstream 2.0kb downstream 2000 false Bd3: 6403250-6405249 Brachypodium distachyon
Bradi3g08210 5.0kb upstream 5.0kb upstream 6424 true Bd3: 6405250-6411673 Brachypodium distachyon
Bradi3g08210 5.0kb upstream 5.0kb upstream 5000 false Bd3: 6406674-6411673 Brachypodium distachyon
Bradi3g08210 5.0kb downstream 5.0kb downstream 6424 true Bd3: 6400250-6406673 Brachypodium distachyon
Bradi3g08210 5.0kb downstream 5.0kb downstream 5000 false Bd3: 6400250-6405249 Brachypodium distachyon
Bradi3g08210 10.0kb upstream 10.0kb upstream 11424 true Bd3: 6405250-6416673 Brachypodium distachyon
Bradi3g08210 10.0kb upstream 10.0kb upstream 10000 false Bd3: 6406674-6416673 Brachypodium distachyon
Bradi3g08210 10.0kb downstream 10.0kb downstream 11424 true Bd3: 6395250-6406673 Brachypodium distachyon
Bradi3g08210 10.0kb downstream 10.0kb downstream 10000 false Bd3: 6395250-6405249 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577381 5269 Grass View MSA
122045392 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.972        
cufflinks 5.486        
cufflinks 5.642        
cufflinks 7.496        
cufflinks 5.919        
cufflinks 4.106        
cufflinks 5.634        
cufflinks 4.655        
cufflinks 4.888        
cufflinks 5.676        
cufflinks 1.346       Low
cufflinks 3.977        
cufflinks 1.483       Low
cufflinks 1.269       Low
cufflinks 3.738        
cufflinks 3.986        
cufflinks 5.672        
cufflinks 9.196       High
cufflinks 6.395        
cufflinks 6.623        
cufflinks 13.339     High High
cufflinks 4.285        
cufflinks 5.674        
cufflinks 5.037        
cufflinks 4.97        
cufflinks 5.308        
cufflinks 0.857       Low
cufflinks 5.942        
cufflinks 5.233        
cufflinks 8.846        

0 Strain