Gene : Bradi3g08860 B. distachyon v3.1
Defline:  (1 of 2) PTHR21495//PTHR21495:SF47 - NUCLEOPORIN-RELATED Genomic Order:  1124
Name:  ? Bradi3g08860 Secondary Identifier:  ? PAC:32823625
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g08860 0.5kb upstream 0.5kb upstream 1696 true Bd3: 6968500-6970195 Brachypodium distachyon
Bradi3g08860 0.5kb upstream 0.5kb upstream 500 false Bd3: 6968500-6968999 Brachypodium distachyon
Bradi3g08860 0.5kb downstream 0.5kb downstream 1696 true Bd3: 6969000-6970695 Brachypodium distachyon
Bradi3g08860 0.5kb downstream 0.5kb downstream 500 false Bd3: 6970196-6970695 Brachypodium distachyon
Bradi3g08860 1.0kb upstream 1.0kb upstream 2196 true Bd3: 6968000-6970195 Brachypodium distachyon
Bradi3g08860 1.0kb upstream 1.0kb upstream 1000 false Bd3: 6968000-6968999 Brachypodium distachyon
Bradi3g08860 1.0kb downstream 1.0kb downstream 2196 true Bd3: 6969000-6971195 Brachypodium distachyon
Bradi3g08860 1.0kb downstream 1.0kb downstream 1000 false Bd3: 6970196-6971195 Brachypodium distachyon
Bradi3g08860 2.0kb upstream 2.0kb upstream 3196 true Bd3: 6967000-6970195 Brachypodium distachyon
Bradi3g08860 2.0kb upstream 2.0kb upstream 2000 false Bd3: 6967000-6968999 Brachypodium distachyon
Bradi3g08860 2.0kb downstream 2.0kb downstream 3196 true Bd3: 6969000-6972195 Brachypodium distachyon
Bradi3g08860 2.0kb downstream 2.0kb downstream 2000 false Bd3: 6970196-6972195 Brachypodium distachyon
Bradi3g08860 5.0kb upstream 5.0kb upstream 6196 true Bd3: 6964000-6970195 Brachypodium distachyon
Bradi3g08860 5.0kb upstream 5.0kb upstream 5000 false Bd3: 6964000-6968999 Brachypodium distachyon
Bradi3g08860 5.0kb downstream 5.0kb downstream 6196 true Bd3: 6969000-6975195 Brachypodium distachyon
Bradi3g08860 5.0kb downstream 5.0kb downstream 5000 false Bd3: 6970196-6975195 Brachypodium distachyon
Bradi3g08860 10.0kb upstream 10.0kb upstream 11196 true Bd3: 6959000-6970195 Brachypodium distachyon
Bradi3g08860 10.0kb upstream 10.0kb upstream 10000 false Bd3: 6959000-6968999 Brachypodium distachyon
Bradi3g08860 10.0kb downstream 10.0kb downstream 11196 true Bd3: 6969000-6980195 Brachypodium distachyon
Bradi3g08860 10.0kb downstream 10.0kb downstream 10000 false Bd3: 6970196-6980195 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031282 5273 Angiosperm View MSA
124589967 5269 Grass View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.603        
cufflinks 0.948        
cufflinks 1.183        
cufflinks 1.189        
cufflinks 1.973        
cufflinks 0.849        
cufflinks 1.383        
cufflinks 1.177        
cufflinks 1.056        
cufflinks 2.245        
cufflinks 0.084       Low
cufflinks 0.624        
cufflinks 0.099       Low
cufflinks 0.075       Low
cufflinks 1.065        
cufflinks 1.557        
cufflinks 1.645        
cufflinks 2.525        
cufflinks 1.613        
cufflinks 0.552        
cufflinks 3.335       High
cufflinks 0.886        
cufflinks 0.757        
cufflinks 0.84        
cufflinks 1.231        
cufflinks 1.814        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.784        
cufflinks 1.982        
cufflinks 2.272        

0 Strain