Gene : Bradi3g08820 B. distachyon v3.1
Defline:  (1 of 1) PTHR33210:SF6 - PROTODERMAL FACTOR 1 Genomic Order:  1121
Name:  ? Bradi3g08820 Secondary Identifier:  ? PAC:32823700
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g08820 0.5kb upstream 0.5kb upstream 3310 true Bd3: 6952455-6955764 Brachypodium distachyon
Bradi3g08820 0.5kb upstream 0.5kb upstream 500 false Bd3: 6952455-6952954 Brachypodium distachyon
Bradi3g08820 0.5kb downstream 0.5kb downstream 3310 true Bd3: 6952955-6956264 Brachypodium distachyon
Bradi3g08820 0.5kb downstream 0.5kb downstream 500 false Bd3: 6955765-6956264 Brachypodium distachyon
Bradi3g08820 1.0kb upstream 1.0kb upstream 3810 true Bd3: 6951955-6955764 Brachypodium distachyon
Bradi3g08820 1.0kb upstream 1.0kb upstream 1000 false Bd3: 6951955-6952954 Brachypodium distachyon
Bradi3g08820 1.0kb downstream 1.0kb downstream 3810 true Bd3: 6952955-6956764 Brachypodium distachyon
Bradi3g08820 1.0kb downstream 1.0kb downstream 1000 false Bd3: 6955765-6956764 Brachypodium distachyon
Bradi3g08820 2.0kb upstream 2.0kb upstream 4810 true Bd3: 6950955-6955764 Brachypodium distachyon
Bradi3g08820 2.0kb upstream 2.0kb upstream 2000 false Bd3: 6950955-6952954 Brachypodium distachyon
Bradi3g08820 2.0kb downstream 2.0kb downstream 4810 true Bd3: 6952955-6957764 Brachypodium distachyon
Bradi3g08820 2.0kb downstream 2.0kb downstream 2000 false Bd3: 6955765-6957764 Brachypodium distachyon
Bradi3g08820 5.0kb upstream 5.0kb upstream 7810 true Bd3: 6947955-6955764 Brachypodium distachyon
Bradi3g08820 5.0kb upstream 5.0kb upstream 5000 false Bd3: 6947955-6952954 Brachypodium distachyon
Bradi3g08820 5.0kb downstream 5.0kb downstream 7810 true Bd3: 6952955-6960764 Brachypodium distachyon
Bradi3g08820 5.0kb downstream 5.0kb downstream 5000 false Bd3: 6955765-6960764 Brachypodium distachyon
Bradi3g08820 10.0kb upstream 10.0kb upstream 12810 true Bd3: 6942955-6955764 Brachypodium distachyon
Bradi3g08820 10.0kb upstream 10.0kb upstream 10000 false Bd3: 6942955-6952954 Brachypodium distachyon
Bradi3g08820 10.0kb downstream 10.0kb downstream 12810 true Bd3: 6952955-6965764 Brachypodium distachyon
Bradi3g08820 10.0kb downstream 10.0kb downstream 10000 false Bd3: 6955765-6965764 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579477 5269 Grass View MSA
122042133 5273 Angiosperm View MSA
121349082 5274 Embryophyte View MSA
123381156 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.739        
cufflinks 4.781        
cufflinks 8.29        
cufflinks 5.938        
cufflinks 3.558        
cufflinks 6.631        
cufflinks 3.361        
cufflinks 5.774        
cufflinks 3.285        
cufflinks 4.881        
cufflinks 0.012     Low Low
cufflinks 12.611     High  
cufflinks 1.462        
cufflinks 0.055     Low Low
cufflinks 5.243        
cufflinks 2.717        
cufflinks 7.078        
cufflinks 3.179        
cufflinks 9.866        
cufflinks 0.469       Low
cufflinks 4.472        
cufflinks 5.57        
cufflinks 2.973        
cufflinks 5.63        
cufflinks 3.883        
cufflinks 6.101        
cufflinks 0.186       Low
cufflinks 4.703        
cufflinks 5.955        
cufflinks 10.284        

0 Strain