Gene : Bradi4g43200 B. distachyon v3.1
Defline:  (1 of 63) PF03514 - GRAS domain family (GRAS) Genomic Order:  5575
Name:  ? Bradi4g43200 Secondary Identifier:  ? PAC:32789748
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g43200 0.5kb upstream 0.5kb upstream 2401 true Bd4: 46937676-46940076 Brachypodium distachyon
Bradi4g43200 0.5kb upstream 0.5kb upstream 500 false Bd4: 46937676-46938175 Brachypodium distachyon
Bradi4g43200 0.5kb downstream 0.5kb downstream 2401 true Bd4: 46938176-46940576 Brachypodium distachyon
Bradi4g43200 0.5kb downstream 0.5kb downstream 500 false Bd4: 46940077-46940576 Brachypodium distachyon
Bradi4g43200 1.0kb upstream 1.0kb upstream 2901 true Bd4: 46937176-46940076 Brachypodium distachyon
Bradi4g43200 1.0kb upstream 1.0kb upstream 1000 false Bd4: 46937176-46938175 Brachypodium distachyon
Bradi4g43200 1.0kb downstream 1.0kb downstream 2901 true Bd4: 46938176-46941076 Brachypodium distachyon
Bradi4g43200 1.0kb downstream 1.0kb downstream 1000 false Bd4: 46940077-46941076 Brachypodium distachyon
Bradi4g43200 2.0kb upstream 2.0kb upstream 3901 true Bd4: 46936176-46940076 Brachypodium distachyon
Bradi4g43200 2.0kb upstream 2.0kb upstream 2000 false Bd4: 46936176-46938175 Brachypodium distachyon
Bradi4g43200 2.0kb downstream 2.0kb downstream 3901 true Bd4: 46938176-46942076 Brachypodium distachyon
Bradi4g43200 2.0kb downstream 2.0kb downstream 2000 false Bd4: 46940077-46942076 Brachypodium distachyon
Bradi4g43200 5.0kb upstream 5.0kb upstream 6901 true Bd4: 46933176-46940076 Brachypodium distachyon
Bradi4g43200 5.0kb upstream 5.0kb upstream 5000 false Bd4: 46933176-46938175 Brachypodium distachyon
Bradi4g43200 5.0kb downstream 5.0kb downstream 6901 true Bd4: 46938176-46945076 Brachypodium distachyon
Bradi4g43200 5.0kb downstream 5.0kb downstream 5000 false Bd4: 46940077-46945076 Brachypodium distachyon
Bradi4g43200 10.0kb upstream 10.0kb upstream 11901 true Bd4: 46928176-46940076 Brachypodium distachyon
Bradi4g43200 10.0kb upstream 10.0kb upstream 10000 false Bd4: 46928176-46938175 Brachypodium distachyon
Bradi4g43200 10.0kb downstream 10.0kb downstream 11901 true Bd4: 46938176-46950076 Brachypodium distachyon
Bradi4g43200 10.0kb downstream 10.0kb downstream 10000 false Bd4: 46940077-46950076 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580876 5269 Grass View MSA
122043320 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.082        
cufflinks 0.076     Low  
cufflinks 0.132        
cufflinks 0.113        
cufflinks 0.104        
cufflinks 0.088     Low  
cufflinks 0.034     Low Low
cufflinks 0.142        
cufflinks 0.145        
cufflinks 0.15        
cufflinks 0.193        
cufflinks 0.103        
cufflinks 0.096        
cufflinks 0.11        
cufflinks 0.067     Low  
cufflinks 0.091        
cufflinks 0.183        
cufflinks 0.112     Low  
cufflinks 1.295       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low Low
cufflinks 0.128        
cufflinks 0.076     Low  
cufflinks 0.077     Low  
cufflinks 0.122        
cufflinks 0.104     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.207        
cufflinks 0.066     Low  
cufflinks 0.095     Low  

0 Strain