Gene : Bradi3g09170 B. distachyon v3.1
Defline:  (1 of 1) PTHR23257//PTHR23257:SF435 - SERINE-THREONINE PROTEIN KINASE // MITOGEN ACTIVATED PROTEIN KINASE KINASE KINASE-LIKE PROTEIN Genomic Order:  1171
Name:  ? Bradi3g09170 Secondary Identifier:  ? PAC:32821681
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g09170 0.5kb upstream 0.5kb upstream 15791 true Bd3: 7294350-7310140 Brachypodium distachyon
Bradi3g09170 0.5kb upstream 0.5kb upstream 500 false Bd3: 7294350-7294849 Brachypodium distachyon
Bradi3g09170 0.5kb downstream 0.5kb downstream 15791 true Bd3: 7294850-7310640 Brachypodium distachyon
Bradi3g09170 0.5kb downstream 0.5kb downstream 500 false Bd3: 7310141-7310640 Brachypodium distachyon
Bradi3g09170 1.0kb upstream 1.0kb upstream 16291 true Bd3: 7293850-7310140 Brachypodium distachyon
Bradi3g09170 1.0kb upstream 1.0kb upstream 1000 false Bd3: 7293850-7294849 Brachypodium distachyon
Bradi3g09170 1.0kb downstream 1.0kb downstream 16291 true Bd3: 7294850-7311140 Brachypodium distachyon
Bradi3g09170 1.0kb downstream 1.0kb downstream 1000 false Bd3: 7310141-7311140 Brachypodium distachyon
Bradi3g09170 2.0kb upstream 2.0kb upstream 17291 true Bd3: 7292850-7310140 Brachypodium distachyon
Bradi3g09170 2.0kb upstream 2.0kb upstream 2000 false Bd3: 7292850-7294849 Brachypodium distachyon
Bradi3g09170 2.0kb downstream 2.0kb downstream 17291 true Bd3: 7294850-7312140 Brachypodium distachyon
Bradi3g09170 2.0kb downstream 2.0kb downstream 2000 false Bd3: 7310141-7312140 Brachypodium distachyon
Bradi3g09170 5.0kb upstream 5.0kb upstream 20291 true Bd3: 7289850-7310140 Brachypodium distachyon
Bradi3g09170 5.0kb upstream 5.0kb upstream 5000 false Bd3: 7289850-7294849 Brachypodium distachyon
Bradi3g09170 5.0kb downstream 5.0kb downstream 20291 true Bd3: 7294850-7315140 Brachypodium distachyon
Bradi3g09170 5.0kb downstream 5.0kb downstream 5000 false Bd3: 7310141-7315140 Brachypodium distachyon
Bradi3g09170 10.0kb upstream 10.0kb upstream 25291 true Bd3: 7284850-7310140 Brachypodium distachyon
Bradi3g09170 10.0kb upstream 10.0kb upstream 10000 false Bd3: 7284850-7294849 Brachypodium distachyon
Bradi3g09170 10.0kb downstream 10.0kb downstream 25291 true Bd3: 7294850-7320140 Brachypodium distachyon
Bradi3g09170 10.0kb downstream 10.0kb downstream 10000 false Bd3: 7310141-7320140 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572071 5269 Grass View MSA
122048343 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351351 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.177        
cufflinks 3.432        
cufflinks 3.402        
cufflinks 2.459        
cufflinks 1.141       Low
cufflinks 2.911        
cufflinks 2.871        
cufflinks 2.267        
cufflinks 2.591        
cufflinks 1.649        
cufflinks 1.213       Low
cufflinks 2.721        
cufflinks 1.801        
cufflinks 1.131       Low
cufflinks 1.589        
cufflinks 2.895        
cufflinks 1.966        
cufflinks 6.745       High
cufflinks 3.068        
cufflinks 0.478       Low
cufflinks 1.979        
cufflinks 3.465        
cufflinks 2.381        
cufflinks 2.412        
cufflinks 2.533        
cufflinks 3.089        
cufflinks 1.62        
cufflinks 2.696        
cufflinks 2.854        
cufflinks 3.266        

0 Strain