Gene : Bradi3g09320 B. distachyon v3.1
Defline:  (1 of 1) PTHR12741:SF22 - CALLOSE SYNTHASE 8-RELATED Genomic Order:  1188
Name:  ? Bradi3g09320 Secondary Identifier:  ? PAC:32815814
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6773 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g09320 0.5kb upstream 0.5kb upstream 18217 true Bd3: 7447897-7466113 Brachypodium distachyon
Bradi3g09320 0.5kb upstream 0.5kb upstream 500 false Bd3: 7447897-7448396 Brachypodium distachyon
Bradi3g09320 0.5kb downstream 0.5kb downstream 18217 true Bd3: 7448397-7466613 Brachypodium distachyon
Bradi3g09320 0.5kb downstream 0.5kb downstream 500 false Bd3: 7466114-7466613 Brachypodium distachyon
Bradi3g09320 1.0kb upstream 1.0kb upstream 18717 true Bd3: 7447397-7466113 Brachypodium distachyon
Bradi3g09320 1.0kb upstream 1.0kb upstream 1000 false Bd3: 7447397-7448396 Brachypodium distachyon
Bradi3g09320 1.0kb downstream 1.0kb downstream 18717 true Bd3: 7448397-7467113 Brachypodium distachyon
Bradi3g09320 1.0kb downstream 1.0kb downstream 1000 false Bd3: 7466114-7467113 Brachypodium distachyon
Bradi3g09320 2.0kb upstream 2.0kb upstream 19717 true Bd3: 7446397-7466113 Brachypodium distachyon
Bradi3g09320 2.0kb upstream 2.0kb upstream 2000 false Bd3: 7446397-7448396 Brachypodium distachyon
Bradi3g09320 2.0kb downstream 2.0kb downstream 19717 true Bd3: 7448397-7468113 Brachypodium distachyon
Bradi3g09320 2.0kb downstream 2.0kb downstream 2000 false Bd3: 7466114-7468113 Brachypodium distachyon
Bradi3g09320 5.0kb upstream 5.0kb upstream 22717 true Bd3: 7443397-7466113 Brachypodium distachyon
Bradi3g09320 5.0kb upstream 5.0kb upstream 5000 false Bd3: 7443397-7448396 Brachypodium distachyon
Bradi3g09320 5.0kb downstream 5.0kb downstream 22717 true Bd3: 7448397-7471113 Brachypodium distachyon
Bradi3g09320 5.0kb downstream 5.0kb downstream 5000 false Bd3: 7466114-7471113 Brachypodium distachyon
Bradi3g09320 10.0kb upstream 10.0kb upstream 27717 true Bd3: 7438397-7466113 Brachypodium distachyon
Bradi3g09320 10.0kb upstream 10.0kb upstream 10000 false Bd3: 7438397-7448396 Brachypodium distachyon
Bradi3g09320 10.0kb downstream 10.0kb downstream 27717 true Bd3: 7448397-7476113 Brachypodium distachyon
Bradi3g09320 10.0kb downstream 10.0kb downstream 10000 false Bd3: 7466114-7476113 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589873 5269 Grass View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.659        
cufflinks 1.715        
cufflinks 1.55        
cufflinks 1.187        
cufflinks 0.372       Low
cufflinks 0.942        
cufflinks 1.07        
cufflinks 1.164        
cufflinks 1.039        
cufflinks 0.739        
cufflinks 0.781        
cufflinks 1.112        
cufflinks 0.503        
cufflinks 0.464        
cufflinks 0.934        
cufflinks 1.438        
cufflinks 0.219       Low
cufflinks 9.906       High
cufflinks 0.536        
cufflinks 0.433        
cufflinks 1.165        
cufflinks 1.825        
cufflinks 1.078        
cufflinks 0.903        
cufflinks 0.803        
cufflinks 1.338        
cufflinks 0.191       Low
cufflinks 1.271        
cufflinks 1.305        
cufflinks 1.316        

0 Strain