Gene : Bradi3g09290 B. distachyon v3.1
Defline:  (1 of 2) PTHR10217//PTHR10217:SF520 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  1184
Name:  ? Bradi3g09290 Secondary Identifier:  ? PAC:32822382
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g09290 0.5kb upstream 0.5kb upstream 7368 true Bd3: 7413035-7420402 Brachypodium distachyon
Bradi3g09290 0.5kb upstream 0.5kb upstream 500 false Bd3: 7419903-7420402 Brachypodium distachyon
Bradi3g09290 0.5kb downstream 0.5kb downstream 7368 true Bd3: 7412535-7419902 Brachypodium distachyon
Bradi3g09290 0.5kb downstream 0.5kb downstream 500 false Bd3: 7412535-7413034 Brachypodium distachyon
Bradi3g09290 1.0kb upstream 1.0kb upstream 7868 true Bd3: 7413035-7420902 Brachypodium distachyon
Bradi3g09290 1.0kb upstream 1.0kb upstream 1000 false Bd3: 7419903-7420902 Brachypodium distachyon
Bradi3g09290 1.0kb downstream 1.0kb downstream 7868 true Bd3: 7412035-7419902 Brachypodium distachyon
Bradi3g09290 1.0kb downstream 1.0kb downstream 1000 false Bd3: 7412035-7413034 Brachypodium distachyon
Bradi3g09290 2.0kb upstream 2.0kb upstream 8868 true Bd3: 7413035-7421902 Brachypodium distachyon
Bradi3g09290 2.0kb upstream 2.0kb upstream 2000 false Bd3: 7419903-7421902 Brachypodium distachyon
Bradi3g09290 2.0kb downstream 2.0kb downstream 8868 true Bd3: 7411035-7419902 Brachypodium distachyon
Bradi3g09290 2.0kb downstream 2.0kb downstream 2000 false Bd3: 7411035-7413034 Brachypodium distachyon
Bradi3g09290 5.0kb upstream 5.0kb upstream 11868 true Bd3: 7413035-7424902 Brachypodium distachyon
Bradi3g09290 5.0kb upstream 5.0kb upstream 5000 false Bd3: 7419903-7424902 Brachypodium distachyon
Bradi3g09290 5.0kb downstream 5.0kb downstream 11868 true Bd3: 7408035-7419902 Brachypodium distachyon
Bradi3g09290 5.0kb downstream 5.0kb downstream 5000 false Bd3: 7408035-7413034 Brachypodium distachyon
Bradi3g09290 10.0kb upstream 10.0kb upstream 16868 true Bd3: 7413035-7429902 Brachypodium distachyon
Bradi3g09290 10.0kb upstream 10.0kb upstream 10000 false Bd3: 7419903-7429902 Brachypodium distachyon
Bradi3g09290 10.0kb downstream 10.0kb downstream 16868 true Bd3: 7403035-7419902 Brachypodium distachyon
Bradi3g09290 10.0kb downstream 10.0kb downstream 10000 false Bd3: 7403035-7413034 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572952 5269 Grass View MSA
122043816 5273 Angiosperm View MSA
121310193 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.691       High
cufflinks 1.966        
cufflinks 2.079        
cufflinks 1.652        
cufflinks 2.709        
cufflinks 3.215        
cufflinks 1.995        
cufflinks 3.718        
cufflinks 3.165        
cufflinks 1.525        
cufflinks 10.993     High High
cufflinks 4.452        
cufflinks 5.324        
cufflinks 8.357     High High
cufflinks 6.587       High
cufflinks 3.435        
cufflinks 2.659        
cufflinks 0.389       Low
cufflinks 0.969       Low
cufflinks 2.193        
cufflinks 1.274        
cufflinks 2.91        
cufflinks 4.187        
cufflinks 3.88        
cufflinks 2.43        
cufflinks 2.245        
cufflinks 10.661     High High
cufflinks 1.699        
cufflinks 1.933        
cufflinks 2.32        

0 Strain