Gene : Bradi3g09490 B. distachyon v3.1
Defline:  (1 of 1) PTHR10159//PTHR10159:SF335 - DUAL SPECIFICITY PROTEIN PHOSPHATASE // SUBFAMILY NOT NAMED Genomic Order:  1214
Name:  ? Bradi3g09490 Secondary Identifier:  ? PAC:32817434
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g09490 0.5kb upstream 0.5kb upstream 3432 true Bd3: 7614170-7617601 Brachypodium distachyon
Bradi3g09490 0.5kb upstream 0.5kb upstream 500 false Bd3: 7614170-7614669 Brachypodium distachyon
Bradi3g09490 0.5kb downstream 0.5kb downstream 3432 true Bd3: 7614670-7618101 Brachypodium distachyon
Bradi3g09490 0.5kb downstream 0.5kb downstream 500 false Bd3: 7617602-7618101 Brachypodium distachyon
Bradi3g09490 1.0kb upstream 1.0kb upstream 3932 true Bd3: 7613670-7617601 Brachypodium distachyon
Bradi3g09490 1.0kb upstream 1.0kb upstream 1000 false Bd3: 7613670-7614669 Brachypodium distachyon
Bradi3g09490 1.0kb downstream 1.0kb downstream 3932 true Bd3: 7614670-7618601 Brachypodium distachyon
Bradi3g09490 1.0kb downstream 1.0kb downstream 1000 false Bd3: 7617602-7618601 Brachypodium distachyon
Bradi3g09490 2.0kb upstream 2.0kb upstream 4932 true Bd3: 7612670-7617601 Brachypodium distachyon
Bradi3g09490 2.0kb upstream 2.0kb upstream 2000 false Bd3: 7612670-7614669 Brachypodium distachyon
Bradi3g09490 2.0kb downstream 2.0kb downstream 4932 true Bd3: 7614670-7619601 Brachypodium distachyon
Bradi3g09490 2.0kb downstream 2.0kb downstream 2000 false Bd3: 7617602-7619601 Brachypodium distachyon
Bradi3g09490 5.0kb upstream 5.0kb upstream 7932 true Bd3: 7609670-7617601 Brachypodium distachyon
Bradi3g09490 5.0kb upstream 5.0kb upstream 5000 false Bd3: 7609670-7614669 Brachypodium distachyon
Bradi3g09490 5.0kb downstream 5.0kb downstream 7932 true Bd3: 7614670-7622601 Brachypodium distachyon
Bradi3g09490 5.0kb downstream 5.0kb downstream 5000 false Bd3: 7617602-7622601 Brachypodium distachyon
Bradi3g09490 10.0kb upstream 10.0kb upstream 12932 true Bd3: 7604670-7617601 Brachypodium distachyon
Bradi3g09490 10.0kb upstream 10.0kb upstream 10000 false Bd3: 7604670-7614669 Brachypodium distachyon
Bradi3g09490 10.0kb downstream 10.0kb downstream 12932 true Bd3: 7614670-7627601 Brachypodium distachyon
Bradi3g09490 10.0kb downstream 10.0kb downstream 10000 false Bd3: 7617602-7627601 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028012 5273 Angiosperm View MSA
124580391 5269 Grass View MSA
121297567 5274 Embryophyte View MSA
123335609 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.186        
cufflinks 0.342        
cufflinks 0.249        
cufflinks 0.37        
cufflinks 0.118       Low
cufflinks 0.311        
cufflinks 0.282        
cufflinks 0.277        
cufflinks 0.317        
cufflinks 0.177        
cufflinks 0.25        
cufflinks 0.192        
cufflinks 0.151       Low
cufflinks 0.228        
cufflinks 0.206        
cufflinks 0.221        
cufflinks 0.363        
cufflinks 0.345        
cufflinks 0.267        
cufflinks 0.055     Low Low
cufflinks 0.37        
cufflinks 0.189        
cufflinks 0.272        
cufflinks 0.299        
cufflinks 0.366        
cufflinks 0.311        
cufflinks 0.294        
cufflinks 0.21        
cufflinks 0.266        
cufflinks 0.308        

0 Strain