Gene : Bradi3g05583 B. distachyon v3.1
Defline:  (1 of 18) PF04782 - Protein of unknown function (DUF632) (DUF632) Genomic Order:  685
Name:  ? Bradi3g05583 Secondary Identifier:  ? PAC:32815404
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g05583 0.5kb upstream 0.5kb upstream 3315 true Bd3: 3951488-3954802 Brachypodium distachyon
Bradi3g05583 0.5kb upstream 0.5kb upstream 500 false Bd3: 3954303-3954802 Brachypodium distachyon
Bradi3g05583 0.5kb downstream 0.5kb downstream 3315 true Bd3: 3950988-3954302 Brachypodium distachyon
Bradi3g05583 0.5kb downstream 0.5kb downstream 500 false Bd3: 3950988-3951487 Brachypodium distachyon
Bradi3g05583 1.0kb upstream 1.0kb upstream 3815 true Bd3: 3951488-3955302 Brachypodium distachyon
Bradi3g05583 1.0kb upstream 1.0kb upstream 1000 false Bd3: 3954303-3955302 Brachypodium distachyon
Bradi3g05583 1.0kb downstream 1.0kb downstream 3815 true Bd3: 3950488-3954302 Brachypodium distachyon
Bradi3g05583 1.0kb downstream 1.0kb downstream 1000 false Bd3: 3950488-3951487 Brachypodium distachyon
Bradi3g05583 2.0kb upstream 2.0kb upstream 4815 true Bd3: 3951488-3956302 Brachypodium distachyon
Bradi3g05583 2.0kb upstream 2.0kb upstream 2000 false Bd3: 3954303-3956302 Brachypodium distachyon
Bradi3g05583 2.0kb downstream 2.0kb downstream 4815 true Bd3: 3949488-3954302 Brachypodium distachyon
Bradi3g05583 2.0kb downstream 2.0kb downstream 2000 false Bd3: 3949488-3951487 Brachypodium distachyon
Bradi3g05583 5.0kb upstream 5.0kb upstream 7815 true Bd3: 3951488-3959302 Brachypodium distachyon
Bradi3g05583 5.0kb upstream 5.0kb upstream 5000 false Bd3: 3954303-3959302 Brachypodium distachyon
Bradi3g05583 5.0kb downstream 5.0kb downstream 7815 true Bd3: 3946488-3954302 Brachypodium distachyon
Bradi3g05583 5.0kb downstream 5.0kb downstream 5000 false Bd3: 3946488-3951487 Brachypodium distachyon
Bradi3g05583 10.0kb upstream 10.0kb upstream 12815 true Bd3: 3951488-3964302 Brachypodium distachyon
Bradi3g05583 10.0kb upstream 10.0kb upstream 10000 false Bd3: 3954303-3964302 Brachypodium distachyon
Bradi3g05583 10.0kb downstream 10.0kb downstream 12815 true Bd3: 3941488-3954302 Brachypodium distachyon
Bradi3g05583 10.0kb downstream 10.0kb downstream 10000 false Bd3: 3941488-3951487 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572228 5269 Grass View MSA
122046534 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.386       High
cufflinks 0.174        
cufflinks 0.201        
cufflinks 0.23        
cufflinks 0.381       High
cufflinks 0.143        
cufflinks 0.173        
cufflinks 0.165        
cufflinks 0.323       High
cufflinks 0.247        
cufflinks 0.22        
cufflinks 0.198        
cufflinks 0.257        
cufflinks 0.262        
cufflinks 0.178        
cufflinks 0.251        
cufflinks 0.085     Low Low
cufflinks 0.236        
cufflinks 0.094     Low Low
cufflinks 0.109     Low  
cufflinks 0.216        
cufflinks 0.131        
cufflinks 0.241        
cufflinks 0.164        
cufflinks 0.161        
cufflinks 0.1     Low Low
cufflinks 0.51       High
cufflinks 0.174        
cufflinks 0.235        
cufflinks 0.315       High

0 Strain