Gene : Bradi4g44167 B. distachyon v3.1
Defline:  (1 of 17) PF04525 - LURP-one-related (LOR) Genomic Order:  5690
Name:  ? Bradi4g44167 Secondary Identifier:  ? PAC:32789057
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g44167 0.5kb upstream 0.5kb upstream 2259 true Bd4: 47609566-47611824 Brachypodium distachyon
Bradi4g44167 0.5kb upstream 0.5kb upstream 500 false Bd4: 47609566-47610065 Brachypodium distachyon
Bradi4g44167 0.5kb downstream 0.5kb downstream 2259 true Bd4: 47610066-47612324 Brachypodium distachyon
Bradi4g44167 0.5kb downstream 0.5kb downstream 500 false Bd4: 47611825-47612324 Brachypodium distachyon
Bradi4g44167 1.0kb upstream 1.0kb upstream 2759 true Bd4: 47609066-47611824 Brachypodium distachyon
Bradi4g44167 1.0kb upstream 1.0kb upstream 1000 false Bd4: 47609066-47610065 Brachypodium distachyon
Bradi4g44167 1.0kb downstream 1.0kb downstream 2759 true Bd4: 47610066-47612824 Brachypodium distachyon
Bradi4g44167 1.0kb downstream 1.0kb downstream 1000 false Bd4: 47611825-47612824 Brachypodium distachyon
Bradi4g44167 2.0kb upstream 2.0kb upstream 3759 true Bd4: 47608066-47611824 Brachypodium distachyon
Bradi4g44167 2.0kb upstream 2.0kb upstream 2000 false Bd4: 47608066-47610065 Brachypodium distachyon
Bradi4g44167 2.0kb downstream 2.0kb downstream 3759 true Bd4: 47610066-47613824 Brachypodium distachyon
Bradi4g44167 2.0kb downstream 2.0kb downstream 2000 false Bd4: 47611825-47613824 Brachypodium distachyon
Bradi4g44167 5.0kb upstream 5.0kb upstream 6759 true Bd4: 47605066-47611824 Brachypodium distachyon
Bradi4g44167 5.0kb upstream 5.0kb upstream 5000 false Bd4: 47605066-47610065 Brachypodium distachyon
Bradi4g44167 5.0kb downstream 5.0kb downstream 6759 true Bd4: 47610066-47616824 Brachypodium distachyon
Bradi4g44167 5.0kb downstream 5.0kb downstream 5000 false Bd4: 47611825-47616824 Brachypodium distachyon
Bradi4g44167 10.0kb upstream 10.0kb upstream 11759 true Bd4: 47600066-47611824 Brachypodium distachyon
Bradi4g44167 10.0kb upstream 10.0kb upstream 10000 false Bd4: 47600066-47610065 Brachypodium distachyon
Bradi4g44167 10.0kb downstream 10.0kb downstream 11759 true Bd4: 47610066-47621824 Brachypodium distachyon
Bradi4g44167 10.0kb downstream 10.0kb downstream 10000 false Bd4: 47611825-47621824 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583669 5269 Grass View MSA
122048664 5273 Angiosperm View MSA
121311063 5274 Embryophyte View MSA
123348415 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.568        
cufflinks 0.82        
cufflinks 0.896        
cufflinks 0.982        
cufflinks 0.77        
cufflinks 0.51        
cufflinks 0.645        
cufflinks 0.423        
cufflinks 0.373        
cufflinks 0.833        
cufflinks 0.126       Low
cufflinks 0.391        
cufflinks 0.105       Low
cufflinks 0.061     Low Low
cufflinks 0.238       Low
cufflinks 0.533        
cufflinks 0.712        
cufflinks 2.413       High
cufflinks 1.549       High
cufflinks 1.285        
cufflinks 1.444       High
cufflinks 0.615        
cufflinks 0.435        
cufflinks 0.348        
cufflinks 0.554        
cufflinks 1.168        
cufflinks 0.1       Low
cufflinks 0.947        
cufflinks 0.638        
cufflinks 0.97        

0 Strain