Gene : Bradi3g05950 B. distachyon v3.1
Defline:  (1 of 1) PTHR11741:SF3 - ELONGATION FACTOR TS Genomic Order:  731
Name:  ? Bradi3g05950 Secondary Identifier:  ? PAC:32816515
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g05950 0.5kb upstream 0.5kb upstream 5923 true Bd3: 4239408-4245330 Brachypodium distachyon
Bradi3g05950 0.5kb upstream 0.5kb upstream 500 false Bd3: 4239408-4239907 Brachypodium distachyon
Bradi3g05950 0.5kb downstream 0.5kb downstream 5923 true Bd3: 4239908-4245830 Brachypodium distachyon
Bradi3g05950 0.5kb downstream 0.5kb downstream 500 false Bd3: 4245331-4245830 Brachypodium distachyon
Bradi3g05950 1.0kb upstream 1.0kb upstream 6423 true Bd3: 4238908-4245330 Brachypodium distachyon
Bradi3g05950 1.0kb upstream 1.0kb upstream 1000 false Bd3: 4238908-4239907 Brachypodium distachyon
Bradi3g05950 1.0kb downstream 1.0kb downstream 6423 true Bd3: 4239908-4246330 Brachypodium distachyon
Bradi3g05950 1.0kb downstream 1.0kb downstream 1000 false Bd3: 4245331-4246330 Brachypodium distachyon
Bradi3g05950 2.0kb upstream 2.0kb upstream 7423 true Bd3: 4237908-4245330 Brachypodium distachyon
Bradi3g05950 2.0kb upstream 2.0kb upstream 2000 false Bd3: 4237908-4239907 Brachypodium distachyon
Bradi3g05950 2.0kb downstream 2.0kb downstream 7423 true Bd3: 4239908-4247330 Brachypodium distachyon
Bradi3g05950 2.0kb downstream 2.0kb downstream 2000 false Bd3: 4245331-4247330 Brachypodium distachyon
Bradi3g05950 5.0kb upstream 5.0kb upstream 10423 true Bd3: 4234908-4245330 Brachypodium distachyon
Bradi3g05950 5.0kb upstream 5.0kb upstream 5000 false Bd3: 4234908-4239907 Brachypodium distachyon
Bradi3g05950 5.0kb downstream 5.0kb downstream 10423 true Bd3: 4239908-4250330 Brachypodium distachyon
Bradi3g05950 5.0kb downstream 5.0kb downstream 5000 false Bd3: 4245331-4250330 Brachypodium distachyon
Bradi3g05950 10.0kb upstream 10.0kb upstream 15423 true Bd3: 4229908-4245330 Brachypodium distachyon
Bradi3g05950 10.0kb upstream 10.0kb upstream 10000 false Bd3: 4229908-4239907 Brachypodium distachyon
Bradi3g05950 10.0kb downstream 10.0kb downstream 15423 true Bd3: 4239908-4255330 Brachypodium distachyon
Bradi3g05950 10.0kb downstream 10.0kb downstream 10000 false Bd3: 4245331-4255330 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575986 5269 Grass View MSA
122043954 5273 Angiosperm View MSA
121346485 5274 Embryophyte View MSA
123425241 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.619     High  
cufflinks 134.114     High High
cufflinks 128.608     High  
cufflinks 114.415     High  
cufflinks 33.613     High  
cufflinks 113.904     High  
cufflinks 109.022     High  
cufflinks 75.078     High  
cufflinks 94.186     High  
cufflinks 61.545     High  
cufflinks 84.061     High  
cufflinks 126.245     High  
cufflinks 68.485     High  
cufflinks 69.67     High  
cufflinks 63.392     High  
cufflinks 114.416     High  
cufflinks 46.721     High  
cufflinks 8.527       Low
cufflinks 26.327     High Low
cufflinks 8.988       Low
cufflinks 35.631     High  
cufflinks 104.842     High  
cufflinks 71.043     High  
cufflinks 89.064     High  
cufflinks 91.901     High  
cufflinks 100.281     High  
cufflinks 49.405     High  
cufflinks 89.998     High  
cufflinks 101.231     High  
cufflinks 99.327     High  

0 Strain