Gene : Bradi3g05930 B. distachyon v3.1
Defline:  (1 of 1) PTHR16517:SF27 - TUBBY-LIKE PROTEIN 8 Genomic Order:  727
Name:  ? Bradi3g05930 Secondary Identifier:  ? PAC:32821343
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g05930 0.5kb upstream 0.5kb upstream 2657 true Bd3: 4219274-4221930 Brachypodium distachyon
Bradi3g05930 0.5kb upstream 0.5kb upstream 500 false Bd3: 4221431-4221930 Brachypodium distachyon
Bradi3g05930 0.5kb downstream 0.5kb downstream 2657 true Bd3: 4218774-4221430 Brachypodium distachyon
Bradi3g05930 0.5kb downstream 0.5kb downstream 500 false Bd3: 4218774-4219273 Brachypodium distachyon
Bradi3g05930 1.0kb upstream 1.0kb upstream 3157 true Bd3: 4219274-4222430 Brachypodium distachyon
Bradi3g05930 1.0kb upstream 1.0kb upstream 1000 false Bd3: 4221431-4222430 Brachypodium distachyon
Bradi3g05930 1.0kb downstream 1.0kb downstream 3157 true Bd3: 4218274-4221430 Brachypodium distachyon
Bradi3g05930 1.0kb downstream 1.0kb downstream 1000 false Bd3: 4218274-4219273 Brachypodium distachyon
Bradi3g05930 2.0kb upstream 2.0kb upstream 4157 true Bd3: 4219274-4223430 Brachypodium distachyon
Bradi3g05930 2.0kb upstream 2.0kb upstream 2000 false Bd3: 4221431-4223430 Brachypodium distachyon
Bradi3g05930 2.0kb downstream 2.0kb downstream 4157 true Bd3: 4217274-4221430 Brachypodium distachyon
Bradi3g05930 2.0kb downstream 2.0kb downstream 2000 false Bd3: 4217274-4219273 Brachypodium distachyon
Bradi3g05930 5.0kb upstream 5.0kb upstream 7157 true Bd3: 4219274-4226430 Brachypodium distachyon
Bradi3g05930 5.0kb upstream 5.0kb upstream 5000 false Bd3: 4221431-4226430 Brachypodium distachyon
Bradi3g05930 5.0kb downstream 5.0kb downstream 7157 true Bd3: 4214274-4221430 Brachypodium distachyon
Bradi3g05930 5.0kb downstream 5.0kb downstream 5000 false Bd3: 4214274-4219273 Brachypodium distachyon
Bradi3g05930 10.0kb upstream 10.0kb upstream 12157 true Bd3: 4219274-4231430 Brachypodium distachyon
Bradi3g05930 10.0kb upstream 10.0kb upstream 10000 false Bd3: 4221431-4231430 Brachypodium distachyon
Bradi3g05930 10.0kb downstream 10.0kb downstream 12157 true Bd3: 4209274-4221430 Brachypodium distachyon
Bradi3g05930 10.0kb downstream 10.0kb downstream 10000 false Bd3: 4209274-4219273 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579921 5269 Grass View MSA
122048608 5273 Angiosperm View MSA
121311037 5274 Embryophyte View MSA
123348391 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.425        
cufflinks 1.752        
cufflinks 1.794        
cufflinks 1.969        
cufflinks 0.707        
cufflinks 1.497        
cufflinks 1.439        
cufflinks 1.493        
cufflinks 1.427        
cufflinks 2.492        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.023        
cufflinks 0.021     Low Low
cufflinks 0.01     Low Low
cufflinks 0.32        
cufflinks 1.636        
cufflinks 2.089        
cufflinks 2.306        
cufflinks 1.178        
cufflinks 0.468        
cufflinks 0.815        
cufflinks 2.07        
cufflinks 1.146        
cufflinks 0.91        
cufflinks 1.347        
cufflinks 3.118        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.551        
cufflinks 2.436        
cufflinks 2.302        

0 Strain