Gene : Bradi3g06190 B. distachyon v3.1
Defline:  (1 of 1) PTHR31065:SF11 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  768
Name:  ? Bradi3g06190 Secondary Identifier:  ? PAC:32819476
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g06190 0.5kb upstream 0.5kb upstream 3046 true Bd3: 4473618-4476663 Brachypodium distachyon
Bradi3g06190 0.5kb upstream 0.5kb upstream 500 false Bd3: 4476164-4476663 Brachypodium distachyon
Bradi3g06190 0.5kb downstream 0.5kb downstream 3046 true Bd3: 4473118-4476163 Brachypodium distachyon
Bradi3g06190 0.5kb downstream 0.5kb downstream 500 false Bd3: 4473118-4473617 Brachypodium distachyon
Bradi3g06190 1.0kb upstream 1.0kb upstream 3546 true Bd3: 4473618-4477163 Brachypodium distachyon
Bradi3g06190 1.0kb upstream 1.0kb upstream 1000 false Bd3: 4476164-4477163 Brachypodium distachyon
Bradi3g06190 1.0kb downstream 1.0kb downstream 3546 true Bd3: 4472618-4476163 Brachypodium distachyon
Bradi3g06190 1.0kb downstream 1.0kb downstream 1000 false Bd3: 4472618-4473617 Brachypodium distachyon
Bradi3g06190 2.0kb upstream 2.0kb upstream 4546 true Bd3: 4473618-4478163 Brachypodium distachyon
Bradi3g06190 2.0kb upstream 2.0kb upstream 2000 false Bd3: 4476164-4478163 Brachypodium distachyon
Bradi3g06190 2.0kb downstream 2.0kb downstream 4546 true Bd3: 4471618-4476163 Brachypodium distachyon
Bradi3g06190 2.0kb downstream 2.0kb downstream 2000 false Bd3: 4471618-4473617 Brachypodium distachyon
Bradi3g06190 5.0kb upstream 5.0kb upstream 7546 true Bd3: 4473618-4481163 Brachypodium distachyon
Bradi3g06190 5.0kb upstream 5.0kb upstream 5000 false Bd3: 4476164-4481163 Brachypodium distachyon
Bradi3g06190 5.0kb downstream 5.0kb downstream 7546 true Bd3: 4468618-4476163 Brachypodium distachyon
Bradi3g06190 5.0kb downstream 5.0kb downstream 5000 false Bd3: 4468618-4473617 Brachypodium distachyon
Bradi3g06190 10.0kb upstream 10.0kb upstream 12546 true Bd3: 4473618-4486163 Brachypodium distachyon
Bradi3g06190 10.0kb upstream 10.0kb upstream 10000 false Bd3: 4476164-4486163 Brachypodium distachyon
Bradi3g06190 10.0kb downstream 10.0kb downstream 12546 true Bd3: 4463618-4476163 Brachypodium distachyon
Bradi3g06190 10.0kb downstream 10.0kb downstream 10000 false Bd3: 4463618-4473617 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588499 5269 Grass View MSA
122044768 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low  
cufflinks 0.041     Low  
cufflinks 0.041     Low  
cufflinks 0.036     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  
cufflinks 0.113        
cufflinks 0.025     Low  
cufflinks 0.04     Low  
cufflinks 0.077     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.013     Low  
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.294       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.069     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.03     Low  
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  

0 Strain