Gene : Bradi3g06107 B. distachyon v3.1
Defline:  (1 of 1) PTHR11638:SF86 - CHAPERONE PROTEIN CLPB4, MITOCHONDRIAL Genomic Order:  757
Name:  ? Bradi3g06107 Secondary Identifier:  ? PAC:32812354
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g06107 0.5kb upstream 0.5kb upstream 6980 true Bd3: 4408352-4415331 Brachypodium distachyon
Bradi3g06107 0.5kb upstream 0.5kb upstream 500 false Bd3: 4414832-4415331 Brachypodium distachyon
Bradi3g06107 0.5kb downstream 0.5kb downstream 6980 true Bd3: 4407852-4414831 Brachypodium distachyon
Bradi3g06107 0.5kb downstream 0.5kb downstream 500 false Bd3: 4407852-4408351 Brachypodium distachyon
Bradi3g06107 1.0kb upstream 1.0kb upstream 7480 true Bd3: 4408352-4415831 Brachypodium distachyon
Bradi3g06107 1.0kb upstream 1.0kb upstream 1000 false Bd3: 4414832-4415831 Brachypodium distachyon
Bradi3g06107 1.0kb downstream 1.0kb downstream 7480 true Bd3: 4407352-4414831 Brachypodium distachyon
Bradi3g06107 1.0kb downstream 1.0kb downstream 1000 false Bd3: 4407352-4408351 Brachypodium distachyon
Bradi3g06107 2.0kb upstream 2.0kb upstream 8480 true Bd3: 4408352-4416831 Brachypodium distachyon
Bradi3g06107 2.0kb upstream 2.0kb upstream 2000 false Bd3: 4414832-4416831 Brachypodium distachyon
Bradi3g06107 2.0kb downstream 2.0kb downstream 8480 true Bd3: 4406352-4414831 Brachypodium distachyon
Bradi3g06107 2.0kb downstream 2.0kb downstream 2000 false Bd3: 4406352-4408351 Brachypodium distachyon
Bradi3g06107 5.0kb upstream 5.0kb upstream 11480 true Bd3: 4408352-4419831 Brachypodium distachyon
Bradi3g06107 5.0kb upstream 5.0kb upstream 5000 false Bd3: 4414832-4419831 Brachypodium distachyon
Bradi3g06107 5.0kb downstream 5.0kb downstream 11480 true Bd3: 4403352-4414831 Brachypodium distachyon
Bradi3g06107 5.0kb downstream 5.0kb downstream 5000 false Bd3: 4403352-4408351 Brachypodium distachyon
Bradi3g06107 10.0kb upstream 10.0kb upstream 16480 true Bd3: 4408352-4424831 Brachypodium distachyon
Bradi3g06107 10.0kb upstream 10.0kb upstream 10000 false Bd3: 4414832-4424831 Brachypodium distachyon
Bradi3g06107 10.0kb downstream 10.0kb downstream 16480 true Bd3: 4398352-4414831 Brachypodium distachyon
Bradi3g06107 10.0kb downstream 10.0kb downstream 10000 false Bd3: 4398352-4408351 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571757 5269 Grass View MSA
122042746 5273 Angiosperm View MSA
121310015 5274 Embryophyte View MSA
123426722 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.466        
cufflinks 2.231        
cufflinks 2.225        
cufflinks 1.876        
cufflinks 2.221        
cufflinks 1.877        
cufflinks 1.771        
cufflinks 4.574       High
cufflinks 2.071        
cufflinks 1.744        
cufflinks 2.322        
cufflinks 6.454       High
cufflinks 1.187        
cufflinks 1.397        
cufflinks 3.959        
cufflinks 1.973        
cufflinks 1.994        
cufflinks 1.424        
cufflinks 1.031       Low
cufflinks 1.905        
cufflinks 1.234        
cufflinks 2.561        
cufflinks 4.497       High
cufflinks 1.755        
cufflinks 1.585        
cufflinks 2.051        
cufflinks 0.769       Low
cufflinks 1.976        
cufflinks 2.342        
cufflinks 2.18        

0 Strain