Gene : Bradi4g44060 B. distachyon v3.1
Defline:  (1 of 3) PF09133 - SANTA (SANT Associated) (SANTA) Genomic Order:  5677
Name:  ? Bradi4g44060 Secondary Identifier:  ? PAC:32787610
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g44060 0.5kb upstream 0.5kb upstream 5864 true Bd4: 47535829-47541692 Brachypodium distachyon
Bradi4g44060 0.5kb upstream 0.5kb upstream 500 false Bd4: 47535829-47536328 Brachypodium distachyon
Bradi4g44060 0.5kb downstream 0.5kb downstream 5864 true Bd4: 47536329-47542192 Brachypodium distachyon
Bradi4g44060 0.5kb downstream 0.5kb downstream 500 false Bd4: 47541693-47542192 Brachypodium distachyon
Bradi4g44060 1.0kb upstream 1.0kb upstream 6364 true Bd4: 47535329-47541692 Brachypodium distachyon
Bradi4g44060 1.0kb upstream 1.0kb upstream 1000 false Bd4: 47535329-47536328 Brachypodium distachyon
Bradi4g44060 1.0kb downstream 1.0kb downstream 6364 true Bd4: 47536329-47542692 Brachypodium distachyon
Bradi4g44060 1.0kb downstream 1.0kb downstream 1000 false Bd4: 47541693-47542692 Brachypodium distachyon
Bradi4g44060 2.0kb upstream 2.0kb upstream 7364 true Bd4: 47534329-47541692 Brachypodium distachyon
Bradi4g44060 2.0kb upstream 2.0kb upstream 2000 false Bd4: 47534329-47536328 Brachypodium distachyon
Bradi4g44060 2.0kb downstream 2.0kb downstream 7364 true Bd4: 47536329-47543692 Brachypodium distachyon
Bradi4g44060 2.0kb downstream 2.0kb downstream 2000 false Bd4: 47541693-47543692 Brachypodium distachyon
Bradi4g44060 5.0kb upstream 5.0kb upstream 10364 true Bd4: 47531329-47541692 Brachypodium distachyon
Bradi4g44060 5.0kb upstream 5.0kb upstream 5000 false Bd4: 47531329-47536328 Brachypodium distachyon
Bradi4g44060 5.0kb downstream 5.0kb downstream 10364 true Bd4: 47536329-47546692 Brachypodium distachyon
Bradi4g44060 5.0kb downstream 5.0kb downstream 5000 false Bd4: 47541693-47546692 Brachypodium distachyon
Bradi4g44060 10.0kb upstream 10.0kb upstream 15364 true Bd4: 47526329-47541692 Brachypodium distachyon
Bradi4g44060 10.0kb upstream 10.0kb upstream 10000 false Bd4: 47526329-47536328 Brachypodium distachyon
Bradi4g44060 10.0kb downstream 10.0kb downstream 15364 true Bd4: 47536329-47551692 Brachypodium distachyon
Bradi4g44060 10.0kb downstream 10.0kb downstream 10000 false Bd4: 47541693-47551692 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589259 5269 Grass View MSA
122043476 5273 Angiosperm View MSA
121351771 5274 Embryophyte View MSA
123382314 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.31       Low
cufflinks 0.728        
cufflinks 0.799        
cufflinks 0.665        
cufflinks 0.374       Low
cufflinks 0.586        
cufflinks 0.607        
cufflinks 0.569        
cufflinks 0.636        
cufflinks 0.525        
cufflinks 0.764        
cufflinks 0.51        
cufflinks 0.409        
cufflinks 0.556        
cufflinks 0.452        
cufflinks 0.566        
cufflinks 0.43        
cufflinks 0.729        
cufflinks 0.654        
cufflinks 0.27       Low
cufflinks 0.646        
cufflinks 0.664        
cufflinks 0.599        
cufflinks 0.603        
cufflinks 0.68        
cufflinks 0.676        
cufflinks 0.588        
cufflinks 0.708        
cufflinks 0.63        
cufflinks 0.696        

0 Strain