Gene : Bradi3g06830 B. distachyon v3.1
Genomic Order:  852 Name:  ? Bradi3g06830
Secondary Identifier:  ? PAC:32821263
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g06830 0.5kb upstream 0.5kb upstream 2045 true Bd3: 5056101-5058145 Brachypodium distachyon
Bradi3g06830 0.5kb upstream 0.5kb upstream 500 false Bd3: 5056101-5056600 Brachypodium distachyon
Bradi3g06830 0.5kb downstream 0.5kb downstream 2045 true Bd3: 5056601-5058645 Brachypodium distachyon
Bradi3g06830 0.5kb downstream 0.5kb downstream 500 false Bd3: 5058146-5058645 Brachypodium distachyon
Bradi3g06830 1.0kb upstream 1.0kb upstream 2545 true Bd3: 5055601-5058145 Brachypodium distachyon
Bradi3g06830 1.0kb upstream 1.0kb upstream 1000 false Bd3: 5055601-5056600 Brachypodium distachyon
Bradi3g06830 1.0kb downstream 1.0kb downstream 2545 true Bd3: 5056601-5059145 Brachypodium distachyon
Bradi3g06830 1.0kb downstream 1.0kb downstream 1000 false Bd3: 5058146-5059145 Brachypodium distachyon
Bradi3g06830 2.0kb upstream 2.0kb upstream 3545 true Bd3: 5054601-5058145 Brachypodium distachyon
Bradi3g06830 2.0kb upstream 2.0kb upstream 2000 false Bd3: 5054601-5056600 Brachypodium distachyon
Bradi3g06830 2.0kb downstream 2.0kb downstream 3545 true Bd3: 5056601-5060145 Brachypodium distachyon
Bradi3g06830 2.0kb downstream 2.0kb downstream 2000 false Bd3: 5058146-5060145 Brachypodium distachyon
Bradi3g06830 5.0kb upstream 5.0kb upstream 6545 true Bd3: 5051601-5058145 Brachypodium distachyon
Bradi3g06830 5.0kb upstream 5.0kb upstream 5000 false Bd3: 5051601-5056600 Brachypodium distachyon
Bradi3g06830 5.0kb downstream 5.0kb downstream 6545 true Bd3: 5056601-5063145 Brachypodium distachyon
Bradi3g06830 5.0kb downstream 5.0kb downstream 5000 false Bd3: 5058146-5063145 Brachypodium distachyon
Bradi3g06830 10.0kb upstream 10.0kb upstream 11545 true Bd3: 5046601-5058145 Brachypodium distachyon
Bradi3g06830 10.0kb upstream 10.0kb upstream 10000 false Bd3: 5046601-5056600 Brachypodium distachyon
Bradi3g06830 10.0kb downstream 10.0kb downstream 11545 true Bd3: 5056601-5068145 Brachypodium distachyon
Bradi3g06830 10.0kb downstream 10.0kb downstream 10000 false Bd3: 5058146-5068145 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579345 5269 Grass View MSA
122048505 5273 Angiosperm View MSA
121310990 5274 Embryophyte View MSA
123348350 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.168        
cufflinks 4.038        
cufflinks 3.897        
cufflinks 4.014        
cufflinks 4.311        
cufflinks 3.885        
cufflinks 4.263        
cufflinks 5.114        
cufflinks 3.981        
cufflinks 4.763        
cufflinks 3.038       Low
cufflinks 2.93       Low
cufflinks 2.401       Low
cufflinks 2.914       Low
cufflinks 3.267        
cufflinks 3.823        
cufflinks 6.287       High
cufflinks 6.112        
cufflinks 7.952       High
cufflinks 5.478        
cufflinks 8.851       High
cufflinks 3.465        
cufflinks 4.71        
cufflinks 4.253        
cufflinks 4.179        
cufflinks 4.033        
cufflinks 4.541        
cufflinks 4.629        
cufflinks 3.923        
cufflinks 5.711        

0 Strain