Gene : Bradi3g07070 B. distachyon v3.1
Defline:  (1 of 1) PTHR24078:SF276 - CHAPERONE PROTEIN DNAJ 6 Genomic Order:  884
Name:  ? Bradi3g07070 Secondary Identifier:  ? PAC:32814705
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g07070 0.5kb upstream 0.5kb upstream 3970 true Bd3: 5247670-5251639 Brachypodium distachyon
Bradi3g07070 0.5kb upstream 0.5kb upstream 500 false Bd3: 5247670-5248169 Brachypodium distachyon
Bradi3g07070 0.5kb downstream 0.5kb downstream 3970 true Bd3: 5248170-5252139 Brachypodium distachyon
Bradi3g07070 0.5kb downstream 0.5kb downstream 500 false Bd3: 5251640-5252139 Brachypodium distachyon
Bradi3g07070 1.0kb upstream 1.0kb upstream 4470 true Bd3: 5247170-5251639 Brachypodium distachyon
Bradi3g07070 1.0kb upstream 1.0kb upstream 1000 false Bd3: 5247170-5248169 Brachypodium distachyon
Bradi3g07070 1.0kb downstream 1.0kb downstream 4470 true Bd3: 5248170-5252639 Brachypodium distachyon
Bradi3g07070 1.0kb downstream 1.0kb downstream 1000 false Bd3: 5251640-5252639 Brachypodium distachyon
Bradi3g07070 2.0kb upstream 2.0kb upstream 5470 true Bd3: 5246170-5251639 Brachypodium distachyon
Bradi3g07070 2.0kb upstream 2.0kb upstream 2000 false Bd3: 5246170-5248169 Brachypodium distachyon
Bradi3g07070 2.0kb downstream 2.0kb downstream 5470 true Bd3: 5248170-5253639 Brachypodium distachyon
Bradi3g07070 2.0kb downstream 2.0kb downstream 2000 false Bd3: 5251640-5253639 Brachypodium distachyon
Bradi3g07070 5.0kb upstream 5.0kb upstream 8470 true Bd3: 5243170-5251639 Brachypodium distachyon
Bradi3g07070 5.0kb upstream 5.0kb upstream 5000 false Bd3: 5243170-5248169 Brachypodium distachyon
Bradi3g07070 5.0kb downstream 5.0kb downstream 8470 true Bd3: 5248170-5256639 Brachypodium distachyon
Bradi3g07070 5.0kb downstream 5.0kb downstream 5000 false Bd3: 5251640-5256639 Brachypodium distachyon
Bradi3g07070 10.0kb upstream 10.0kb upstream 13470 true Bd3: 5238170-5251639 Brachypodium distachyon
Bradi3g07070 10.0kb upstream 10.0kb upstream 10000 false Bd3: 5238170-5248169 Brachypodium distachyon
Bradi3g07070 10.0kb downstream 10.0kb downstream 13470 true Bd3: 5248170-5261639 Brachypodium distachyon
Bradi3g07070 10.0kb downstream 10.0kb downstream 10000 false Bd3: 5251640-5261639 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026181 5273 Angiosperm View MSA
124572645 5269 Grass View MSA
121344155 5274 Embryophyte View MSA
123428818 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.226       Low
cufflinks 5.275        
cufflinks 5.208        
cufflinks 4.615        
cufflinks 3.003       Low
cufflinks 4.466        
cufflinks 4.703        
cufflinks 3.68        
cufflinks 4.561        
cufflinks 6.075       High
cufflinks 4.092        
cufflinks 4.194        
cufflinks 3.275       Low
cufflinks 3.742        
cufflinks 3.142       Low
cufflinks 4.095        
cufflinks 5.653        
cufflinks 6.279       High
cufflinks 4.946        
cufflinks 2.457       Low
cufflinks 6.403       High
cufflinks 5.243        
cufflinks 3.432        
cufflinks 4.165        
cufflinks 5.123        
cufflinks 5.596        
cufflinks 4.537        
cufflinks 6.065       High
cufflinks 6.18       High
cufflinks 5.27        

0 Strain