Gene : Bradi3g07020 B. distachyon v3.1
Defline:  (1 of 1) KOG4416 - Uncharacterized conserved protein Genomic Order:  879
Name:  ? Bradi3g07020 Secondary Identifier:  ? PAC:32812220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g07020 0.5kb upstream 0.5kb upstream 15277 true Bd3: 5203946-5219222 Brachypodium distachyon
Bradi3g07020 0.5kb upstream 0.5kb upstream 500 false Bd3: 5218723-5219222 Brachypodium distachyon
Bradi3g07020 0.5kb downstream 0.5kb downstream 15277 true Bd3: 5203446-5218722 Brachypodium distachyon
Bradi3g07020 0.5kb downstream 0.5kb downstream 500 false Bd3: 5203446-5203945 Brachypodium distachyon
Bradi3g07020 1.0kb upstream 1.0kb upstream 15777 true Bd3: 5203946-5219722 Brachypodium distachyon
Bradi3g07020 1.0kb upstream 1.0kb upstream 1000 false Bd3: 5218723-5219722 Brachypodium distachyon
Bradi3g07020 1.0kb downstream 1.0kb downstream 15777 true Bd3: 5202946-5218722 Brachypodium distachyon
Bradi3g07020 1.0kb downstream 1.0kb downstream 1000 false Bd3: 5202946-5203945 Brachypodium distachyon
Bradi3g07020 2.0kb upstream 2.0kb upstream 16777 true Bd3: 5203946-5220722 Brachypodium distachyon
Bradi3g07020 2.0kb upstream 2.0kb upstream 2000 false Bd3: 5218723-5220722 Brachypodium distachyon
Bradi3g07020 2.0kb downstream 2.0kb downstream 16777 true Bd3: 5201946-5218722 Brachypodium distachyon
Bradi3g07020 2.0kb downstream 2.0kb downstream 2000 false Bd3: 5201946-5203945 Brachypodium distachyon
Bradi3g07020 5.0kb upstream 5.0kb upstream 19777 true Bd3: 5203946-5223722 Brachypodium distachyon
Bradi3g07020 5.0kb upstream 5.0kb upstream 5000 false Bd3: 5218723-5223722 Brachypodium distachyon
Bradi3g07020 5.0kb downstream 5.0kb downstream 19777 true Bd3: 5198946-5218722 Brachypodium distachyon
Bradi3g07020 5.0kb downstream 5.0kb downstream 5000 false Bd3: 5198946-5203945 Brachypodium distachyon
Bradi3g07020 10.0kb upstream 10.0kb upstream 24777 true Bd3: 5203946-5228722 Brachypodium distachyon
Bradi3g07020 10.0kb upstream 10.0kb upstream 10000 false Bd3: 5218723-5228722 Brachypodium distachyon
Bradi3g07020 10.0kb downstream 10.0kb downstream 24777 true Bd3: 5193946-5218722 Brachypodium distachyon
Bradi3g07020 10.0kb downstream 10.0kb downstream 10000 false Bd3: 5193946-5203945 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584784 5269 Grass View MSA
122043018 5273 Angiosperm View MSA
121349470 5274 Embryophyte View MSA
123427558 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.603        
cufflinks 2.17        
cufflinks 2.034        
cufflinks 1.781        
cufflinks 1.439        
cufflinks 2.027        
cufflinks 1.966        
cufflinks 1.881        
cufflinks 1.852        
cufflinks 1.223        
cufflinks 1.702        
cufflinks 2.038        
cufflinks 1.21        
cufflinks 1.227        
cufflinks 1.314        
cufflinks 2.091        
cufflinks 1.775        
cufflinks 4.638       High
cufflinks 2.731       High
cufflinks 0.488       Low
cufflinks 2.054        
cufflinks 2.113        
cufflinks 1.925        
cufflinks 1.947        
cufflinks 1.799        
cufflinks 1.931        
cufflinks 1.649        
cufflinks 1.677        
cufflinks 1.78        
cufflinks 2.374        

0 Strain