Gene : Bradi4g43780 B. distachyon v3.1
Defline:  (1 of 3) 2.7.1.137 - Phosphatidylinositol 3-kinase / Type III phosphoinositide 3-kinase Genomic Order:  5641
Name:  ? Bradi4g43780 Secondary Identifier:  ? PAC:32787482
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6352 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g43780 0.5kb upstream 0.5kb upstream 5473 true Bd4: 47305353-47310825 Brachypodium distachyon
Bradi4g43780 0.5kb upstream 0.5kb upstream 500 false Bd4: 47305353-47305852 Brachypodium distachyon
Bradi4g43780 0.5kb downstream 0.5kb downstream 5473 true Bd4: 47305853-47311325 Brachypodium distachyon
Bradi4g43780 0.5kb downstream 0.5kb downstream 500 false Bd4: 47310826-47311325 Brachypodium distachyon
Bradi4g43780 1.0kb upstream 1.0kb upstream 5973 true Bd4: 47304853-47310825 Brachypodium distachyon
Bradi4g43780 1.0kb upstream 1.0kb upstream 1000 false Bd4: 47304853-47305852 Brachypodium distachyon
Bradi4g43780 1.0kb downstream 1.0kb downstream 5973 true Bd4: 47305853-47311825 Brachypodium distachyon
Bradi4g43780 1.0kb downstream 1.0kb downstream 1000 false Bd4: 47310826-47311825 Brachypodium distachyon
Bradi4g43780 2.0kb upstream 2.0kb upstream 6973 true Bd4: 47303853-47310825 Brachypodium distachyon
Bradi4g43780 2.0kb upstream 2.0kb upstream 2000 false Bd4: 47303853-47305852 Brachypodium distachyon
Bradi4g43780 2.0kb downstream 2.0kb downstream 6973 true Bd4: 47305853-47312825 Brachypodium distachyon
Bradi4g43780 2.0kb downstream 2.0kb downstream 2000 false Bd4: 47310826-47312825 Brachypodium distachyon
Bradi4g43780 5.0kb upstream 5.0kb upstream 9973 true Bd4: 47300853-47310825 Brachypodium distachyon
Bradi4g43780 5.0kb upstream 5.0kb upstream 5000 false Bd4: 47300853-47305852 Brachypodium distachyon
Bradi4g43780 5.0kb downstream 5.0kb downstream 9973 true Bd4: 47305853-47315825 Brachypodium distachyon
Bradi4g43780 5.0kb downstream 5.0kb downstream 5000 false Bd4: 47310826-47315825 Brachypodium distachyon
Bradi4g43780 10.0kb upstream 10.0kb upstream 14973 true Bd4: 47295853-47310825 Brachypodium distachyon
Bradi4g43780 10.0kb upstream 10.0kb upstream 10000 false Bd4: 47295853-47305852 Brachypodium distachyon
Bradi4g43780 10.0kb downstream 10.0kb downstream 14973 true Bd4: 47305853-47320825 Brachypodium distachyon
Bradi4g43780 10.0kb downstream 10.0kb downstream 10000 false Bd4: 47310826-47320825 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585937 5269 Grass View MSA
122042854 5273 Angiosperm View MSA
121346358 5274 Embryophyte View MSA
123428663 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.951        
cufflinks 2.489        
cufflinks 2.624        
cufflinks 2.51        
cufflinks 2.005       Low
cufflinks 2.248        
cufflinks 2.126       Low
cufflinks 2.485        
cufflinks 2.231        
cufflinks 3.009        
cufflinks 2.964        
cufflinks 2.781        
cufflinks 2.073       Low
cufflinks 2.327        
cufflinks 2.433        
cufflinks 1.94       Low
cufflinks 2.86        
cufflinks 3.433       High
cufflinks 2.648        
cufflinks 2.427        
cufflinks 2.519        
cufflinks 2.586        
cufflinks 2.457        
cufflinks 2.407        
cufflinks 2.756        
cufflinks 2.882        
cufflinks 3.493       High
cufflinks 2.768        
cufflinks 2.364        
cufflinks 2.755        

0 Strain