Gene : Bradi3g07160 B. distachyon v3.1
Defline:  (1 of 63) PF03514 - GRAS domain family (GRAS) Genomic Order:  896
Name:  ? Bradi3g07160 Secondary Identifier:  ? PAC:32820352
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g07160 0.5kb upstream 0.5kb upstream 1730 true Bd3: 5319269-5320998 Brachypodium distachyon
Bradi3g07160 0.5kb upstream 0.5kb upstream 500 false Bd3: 5320499-5320998 Brachypodium distachyon
Bradi3g07160 0.5kb downstream 0.5kb downstream 1730 true Bd3: 5318769-5320498 Brachypodium distachyon
Bradi3g07160 0.5kb downstream 0.5kb downstream 500 false Bd3: 5318769-5319268 Brachypodium distachyon
Bradi3g07160 1.0kb upstream 1.0kb upstream 2230 true Bd3: 5319269-5321498 Brachypodium distachyon
Bradi3g07160 1.0kb upstream 1.0kb upstream 1000 false Bd3: 5320499-5321498 Brachypodium distachyon
Bradi3g07160 1.0kb downstream 1.0kb downstream 2230 true Bd3: 5318269-5320498 Brachypodium distachyon
Bradi3g07160 1.0kb downstream 1.0kb downstream 1000 false Bd3: 5318269-5319268 Brachypodium distachyon
Bradi3g07160 2.0kb upstream 2.0kb upstream 3230 true Bd3: 5319269-5322498 Brachypodium distachyon
Bradi3g07160 2.0kb upstream 2.0kb upstream 2000 false Bd3: 5320499-5322498 Brachypodium distachyon
Bradi3g07160 2.0kb downstream 2.0kb downstream 3230 true Bd3: 5317269-5320498 Brachypodium distachyon
Bradi3g07160 2.0kb downstream 2.0kb downstream 2000 false Bd3: 5317269-5319268 Brachypodium distachyon
Bradi3g07160 5.0kb upstream 5.0kb upstream 6230 true Bd3: 5319269-5325498 Brachypodium distachyon
Bradi3g07160 5.0kb upstream 5.0kb upstream 5000 false Bd3: 5320499-5325498 Brachypodium distachyon
Bradi3g07160 5.0kb downstream 5.0kb downstream 6230 true Bd3: 5314269-5320498 Brachypodium distachyon
Bradi3g07160 5.0kb downstream 5.0kb downstream 5000 false Bd3: 5314269-5319268 Brachypodium distachyon
Bradi3g07160 10.0kb upstream 10.0kb upstream 11230 true Bd3: 5319269-5330498 Brachypodium distachyon
Bradi3g07160 10.0kb upstream 10.0kb upstream 10000 false Bd3: 5320499-5330498 Brachypodium distachyon
Bradi3g07160 10.0kb downstream 10.0kb downstream 11230 true Bd3: 5309269-5320498 Brachypodium distachyon
Bradi3g07160 10.0kb downstream 10.0kb downstream 10000 false Bd3: 5309269-5319268 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585376 5269 Grass View MSA
122041925 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low Low
cufflinks 0.034     Low  
cufflinks 0.022     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.067     Low  
cufflinks 0.02     Low  
cufflinks 0.022     Low  
cufflinks 0.021     Low  
cufflinks 0.012     Low  
cufflinks 0.013     Low  
cufflinks 0.053     Low  
cufflinks 0.047     Low  
cufflinks 0.018     Low  
cufflinks 0.014     Low  
cufflinks 0.045     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.371       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.037     Low  
cufflinks 0.072     Low  
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  

0 Strain