Gene : Bradi3g07286 B. distachyon v3.1
Defline:  (1 of 1) PTHR12917:SF1 - AT13091P Genomic Order:  917
Name:  ? Bradi3g07286 Secondary Identifier:  ? PAC:32815403
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g07286 0.5kb upstream 0.5kb upstream 8387 true Bd3: 5434462-5442848 Brachypodium distachyon
Bradi3g07286 0.5kb upstream 0.5kb upstream 500 false Bd3: 5442349-5442848 Brachypodium distachyon
Bradi3g07286 0.5kb downstream 0.5kb downstream 8387 true Bd3: 5433962-5442348 Brachypodium distachyon
Bradi3g07286 0.5kb downstream 0.5kb downstream 500 false Bd3: 5433962-5434461 Brachypodium distachyon
Bradi3g07286 1.0kb upstream 1.0kb upstream 8887 true Bd3: 5434462-5443348 Brachypodium distachyon
Bradi3g07286 1.0kb upstream 1.0kb upstream 1000 false Bd3: 5442349-5443348 Brachypodium distachyon
Bradi3g07286 1.0kb downstream 1.0kb downstream 8887 true Bd3: 5433462-5442348 Brachypodium distachyon
Bradi3g07286 1.0kb downstream 1.0kb downstream 1000 false Bd3: 5433462-5434461 Brachypodium distachyon
Bradi3g07286 2.0kb upstream 2.0kb upstream 9887 true Bd3: 5434462-5444348 Brachypodium distachyon
Bradi3g07286 2.0kb upstream 2.0kb upstream 2000 false Bd3: 5442349-5444348 Brachypodium distachyon
Bradi3g07286 2.0kb downstream 2.0kb downstream 9887 true Bd3: 5432462-5442348 Brachypodium distachyon
Bradi3g07286 2.0kb downstream 2.0kb downstream 2000 false Bd3: 5432462-5434461 Brachypodium distachyon
Bradi3g07286 5.0kb upstream 5.0kb upstream 12887 true Bd3: 5434462-5447348 Brachypodium distachyon
Bradi3g07286 5.0kb upstream 5.0kb upstream 5000 false Bd3: 5442349-5447348 Brachypodium distachyon
Bradi3g07286 5.0kb downstream 5.0kb downstream 12887 true Bd3: 5429462-5442348 Brachypodium distachyon
Bradi3g07286 5.0kb downstream 5.0kb downstream 5000 false Bd3: 5429462-5434461 Brachypodium distachyon
Bradi3g07286 10.0kb upstream 10.0kb upstream 17887 true Bd3: 5434462-5452348 Brachypodium distachyon
Bradi3g07286 10.0kb upstream 10.0kb upstream 10000 false Bd3: 5442349-5452348 Brachypodium distachyon
Bradi3g07286 10.0kb downstream 10.0kb downstream 17887 true Bd3: 5424462-5442348 Brachypodium distachyon
Bradi3g07286 10.0kb downstream 10.0kb downstream 10000 false Bd3: 5424462-5434461 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575071 5269 Grass View MSA
122047571 5273 Angiosperm View MSA
121343926 5274 Embryophyte View MSA
123424063 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.186        
cufflinks 6.118        
cufflinks 5.591        
cufflinks 6.157        
cufflinks 4.746        
cufflinks 5.929        
cufflinks 5.646        
cufflinks 5.249        
cufflinks 5.65        
cufflinks 4.705        
cufflinks 3.58       Low
cufflinks 5.625        
cufflinks 3.559       Low
cufflinks 2.961       Low
cufflinks 4.707        
cufflinks 6.59        
cufflinks 6.339        
cufflinks 12.944     High High
cufflinks 5.347        
cufflinks 2.895       Low
cufflinks 7.705        
cufflinks 5.456        
cufflinks 5.129        
cufflinks 5.902        
cufflinks 6.029        
cufflinks 5.841        
cufflinks 3.951        
cufflinks 4.977        
cufflinks 4.542        
cufflinks 8.365       High

0 Strain