Gene : Bradi4g43660 B. distachyon v3.1
Defline:  (1 of 2) PF13233 - Complex1_LYR-like (Complex1_LYR_2) Genomic Order:  5625
Name:  ? Bradi4g43660 Secondary Identifier:  ? PAC:32786512
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g43660 0.5kb upstream 0.5kb upstream 1861 true Bd4: 47227535-47229395 Brachypodium distachyon
Bradi4g43660 0.5kb upstream 0.5kb upstream 500 false Bd4: 47228896-47229395 Brachypodium distachyon
Bradi4g43660 0.5kb downstream 0.5kb downstream 1861 true Bd4: 47227035-47228895 Brachypodium distachyon
Bradi4g43660 0.5kb downstream 0.5kb downstream 500 false Bd4: 47227035-47227534 Brachypodium distachyon
Bradi4g43660 1.0kb upstream 1.0kb upstream 2361 true Bd4: 47227535-47229895 Brachypodium distachyon
Bradi4g43660 1.0kb upstream 1.0kb upstream 1000 false Bd4: 47228896-47229895 Brachypodium distachyon
Bradi4g43660 1.0kb downstream 1.0kb downstream 2361 true Bd4: 47226535-47228895 Brachypodium distachyon
Bradi4g43660 1.0kb downstream 1.0kb downstream 1000 false Bd4: 47226535-47227534 Brachypodium distachyon
Bradi4g43660 2.0kb upstream 2.0kb upstream 3361 true Bd4: 47227535-47230895 Brachypodium distachyon
Bradi4g43660 2.0kb upstream 2.0kb upstream 2000 false Bd4: 47228896-47230895 Brachypodium distachyon
Bradi4g43660 2.0kb downstream 2.0kb downstream 3361 true Bd4: 47225535-47228895 Brachypodium distachyon
Bradi4g43660 2.0kb downstream 2.0kb downstream 2000 false Bd4: 47225535-47227534 Brachypodium distachyon
Bradi4g43660 5.0kb upstream 5.0kb upstream 6361 true Bd4: 47227535-47233895 Brachypodium distachyon
Bradi4g43660 5.0kb upstream 5.0kb upstream 5000 false Bd4: 47228896-47233895 Brachypodium distachyon
Bradi4g43660 5.0kb downstream 5.0kb downstream 6361 true Bd4: 47222535-47228895 Brachypodium distachyon
Bradi4g43660 5.0kb downstream 5.0kb downstream 5000 false Bd4: 47222535-47227534 Brachypodium distachyon
Bradi4g43660 10.0kb upstream 10.0kb upstream 11361 true Bd4: 47227535-47238895 Brachypodium distachyon
Bradi4g43660 10.0kb upstream 10.0kb upstream 10000 false Bd4: 47228896-47238895 Brachypodium distachyon
Bradi4g43660 10.0kb downstream 10.0kb downstream 11361 true Bd4: 47217535-47228895 Brachypodium distachyon
Bradi4g43660 10.0kb downstream 10.0kb downstream 10000 false Bd4: 47217535-47227534 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569586 5269 Grass View MSA
122042390 5273 Angiosperm View MSA
121351633 5274 Embryophyte View MSA
123426034 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.3        
cufflinks 8.882        
cufflinks 9.214        
cufflinks 12.756     High High
cufflinks 6.222        
cufflinks 6.305        
cufflinks 9.167        
cufflinks 6.343        
cufflinks 6.173        
cufflinks 11.737     High  
cufflinks 4.804        
cufflinks 3.802       Low
cufflinks 2.707       Low
cufflinks 3.984       Low
cufflinks 3.785       Low
cufflinks 6.949        
cufflinks 9.976        
cufflinks 8.777        
cufflinks 13.395     High High
cufflinks 6.227        
cufflinks 15.432     High High
cufflinks 6.893        
cufflinks 6.473        
cufflinks 6.557        
cufflinks 10.16     High  
cufflinks 10.753        
cufflinks 2.863       Low
cufflinks 12.858     High High
cufflinks 9.199        
cufflinks 9.118        

0 Strain