Gene : Bradi3g07660 B. distachyon v3.1
Defline:  (1 of 1) K02295 - cryptochrome (CRY) Genomic Order:  969
Name:  ? Bradi3g07660 Secondary Identifier:  ? PAC:32818696
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g07660 0.5kb upstream 0.5kb upstream 4503 true Bd3: 5788374-5792876 Brachypodium distachyon
Bradi3g07660 0.5kb upstream 0.5kb upstream 500 false Bd3: 5788374-5788873 Brachypodium distachyon
Bradi3g07660 0.5kb downstream 0.5kb downstream 4503 true Bd3: 5788874-5793376 Brachypodium distachyon
Bradi3g07660 0.5kb downstream 0.5kb downstream 500 false Bd3: 5792877-5793376 Brachypodium distachyon
Bradi3g07660 1.0kb upstream 1.0kb upstream 5003 true Bd3: 5787874-5792876 Brachypodium distachyon
Bradi3g07660 1.0kb upstream 1.0kb upstream 1000 false Bd3: 5787874-5788873 Brachypodium distachyon
Bradi3g07660 1.0kb downstream 1.0kb downstream 5003 true Bd3: 5788874-5793876 Brachypodium distachyon
Bradi3g07660 1.0kb downstream 1.0kb downstream 1000 false Bd3: 5792877-5793876 Brachypodium distachyon
Bradi3g07660 2.0kb upstream 2.0kb upstream 6003 true Bd3: 5786874-5792876 Brachypodium distachyon
Bradi3g07660 2.0kb upstream 2.0kb upstream 2000 false Bd3: 5786874-5788873 Brachypodium distachyon
Bradi3g07660 2.0kb downstream 2.0kb downstream 6003 true Bd3: 5788874-5794876 Brachypodium distachyon
Bradi3g07660 2.0kb downstream 2.0kb downstream 2000 false Bd3: 5792877-5794876 Brachypodium distachyon
Bradi3g07660 5.0kb upstream 5.0kb upstream 9003 true Bd3: 5783874-5792876 Brachypodium distachyon
Bradi3g07660 5.0kb upstream 5.0kb upstream 5000 false Bd3: 5783874-5788873 Brachypodium distachyon
Bradi3g07660 5.0kb downstream 5.0kb downstream 9003 true Bd3: 5788874-5797876 Brachypodium distachyon
Bradi3g07660 5.0kb downstream 5.0kb downstream 5000 false Bd3: 5792877-5797876 Brachypodium distachyon
Bradi3g07660 10.0kb upstream 10.0kb upstream 14003 true Bd3: 5778874-5792876 Brachypodium distachyon
Bradi3g07660 10.0kb upstream 10.0kb upstream 10000 false Bd3: 5778874-5788873 Brachypodium distachyon
Bradi3g07660 10.0kb downstream 10.0kb downstream 14003 true Bd3: 5788874-5802876 Brachypodium distachyon
Bradi3g07660 10.0kb downstream 10.0kb downstream 10000 false Bd3: 5792877-5802876 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575728 5269 Grass View MSA
122046460 5273 Angiosperm View MSA
121346822 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.672        
cufflinks 3.148        
cufflinks 5.086       High
cufflinks 3.638        
cufflinks 2.934        
cufflinks 2.231        
cufflinks 2.321        
cufflinks 4.974        
cufflinks 2.478        
cufflinks 5.125       High
cufflinks 0.749       Low
cufflinks 2.657        
cufflinks 2.27        
cufflinks 0.604       Low
cufflinks 7.152       High
cufflinks 2.238        
cufflinks 4.455        
cufflinks 2.096        
cufflinks 3.325        
cufflinks 0.625       Low
cufflinks 2.941        
cufflinks 5.099       High
cufflinks 5.412       High
cufflinks 2.659        
cufflinks 2.009        
cufflinks 5.901       High
cufflinks 1.094       Low
cufflinks 6.069       High
cufflinks 5.712       High
cufflinks 3.043        

0 Strain