Gene : Bradi3g12894 B. distachyon v3.1
Defline:  (1 of 7) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  1590
Name:  ? Bradi3g12894 Secondary Identifier:  ? PAC:32819144
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g12894 0.5kb upstream 0.5kb upstream 8460 true Bd3: 11584035-11592494 Brachypodium distachyon
Bradi3g12894 0.5kb upstream 0.5kb upstream 500 false Bd3: 11591995-11592494 Brachypodium distachyon
Bradi3g12894 0.5kb downstream 0.5kb downstream 8460 true Bd3: 11583535-11591994 Brachypodium distachyon
Bradi3g12894 0.5kb downstream 0.5kb downstream 500 false Bd3: 11583535-11584034 Brachypodium distachyon
Bradi3g12894 1.0kb upstream 1.0kb upstream 8960 true Bd3: 11584035-11592994 Brachypodium distachyon
Bradi3g12894 1.0kb upstream 1.0kb upstream 1000 false Bd3: 11591995-11592994 Brachypodium distachyon
Bradi3g12894 1.0kb downstream 1.0kb downstream 8960 true Bd3: 11583035-11591994 Brachypodium distachyon
Bradi3g12894 1.0kb downstream 1.0kb downstream 1000 false Bd3: 11583035-11584034 Brachypodium distachyon
Bradi3g12894 2.0kb upstream 2.0kb upstream 9960 true Bd3: 11584035-11593994 Brachypodium distachyon
Bradi3g12894 2.0kb upstream 2.0kb upstream 2000 false Bd3: 11591995-11593994 Brachypodium distachyon
Bradi3g12894 2.0kb downstream 2.0kb downstream 9960 true Bd3: 11582035-11591994 Brachypodium distachyon
Bradi3g12894 2.0kb downstream 2.0kb downstream 2000 false Bd3: 11582035-11584034 Brachypodium distachyon
Bradi3g12894 5.0kb upstream 5.0kb upstream 12960 true Bd3: 11584035-11596994 Brachypodium distachyon
Bradi3g12894 5.0kb upstream 5.0kb upstream 5000 false Bd3: 11591995-11596994 Brachypodium distachyon
Bradi3g12894 5.0kb downstream 5.0kb downstream 12960 true Bd3: 11579035-11591994 Brachypodium distachyon
Bradi3g12894 5.0kb downstream 5.0kb downstream 5000 false Bd3: 11579035-11584034 Brachypodium distachyon
Bradi3g12894 10.0kb upstream 10.0kb upstream 17960 true Bd3: 11584035-11601994 Brachypodium distachyon
Bradi3g12894 10.0kb upstream 10.0kb upstream 10000 false Bd3: 11591995-11601994 Brachypodium distachyon
Bradi3g12894 10.0kb downstream 10.0kb downstream 17960 true Bd3: 11574035-11591994 Brachypodium distachyon
Bradi3g12894 10.0kb downstream 10.0kb downstream 10000 false Bd3: 11574035-11584034 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579046 5269 Grass View MSA
122049014 5273 Angiosperm View MSA
121311208 5274 Embryophyte View MSA
123348533 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.163        
cufflinks 5.617        
cufflinks 5.409        
cufflinks 4.302        
cufflinks 2.822       Low
cufflinks 5.032        
cufflinks 4.595        
cufflinks 5.099        
cufflinks 4.981        
cufflinks 2.865       Low
cufflinks 5.199        
cufflinks 5.816        
cufflinks 4.398        
cufflinks 3.62        
cufflinks 4.848        
cufflinks 4.609        
cufflinks 2.944       Low
cufflinks 11.017       High
cufflinks 4.039        
cufflinks 2.326       Low
cufflinks 4.166        
cufflinks 5.668        
cufflinks 4.951        
cufflinks 4.672        
cufflinks 3.819        
cufflinks 4.663        
cufflinks 5.38        
cufflinks 4.728        
cufflinks 4.727        
cufflinks 5.933        

0 Strain