Gene : Bradi3g12910 B. distachyon v3.1
Defline:  (1 of 81) PF02362 - B3 DNA binding domain (B3) Genomic Order:  1592
Name:  ? Bradi3g12910 Secondary Identifier:  ? PAC:32815266
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g12910 0.5kb upstream 0.5kb upstream 4619 true Bd3: 11603569-11608187 Brachypodium distachyon
Bradi3g12910 0.5kb upstream 0.5kb upstream 500 false Bd3: 11607688-11608187 Brachypodium distachyon
Bradi3g12910 0.5kb downstream 0.5kb downstream 4619 true Bd3: 11603069-11607687 Brachypodium distachyon
Bradi3g12910 0.5kb downstream 0.5kb downstream 500 false Bd3: 11603069-11603568 Brachypodium distachyon
Bradi3g12910 1.0kb upstream 1.0kb upstream 5119 true Bd3: 11603569-11608687 Brachypodium distachyon
Bradi3g12910 1.0kb upstream 1.0kb upstream 1000 false Bd3: 11607688-11608687 Brachypodium distachyon
Bradi3g12910 1.0kb downstream 1.0kb downstream 5119 true Bd3: 11602569-11607687 Brachypodium distachyon
Bradi3g12910 1.0kb downstream 1.0kb downstream 1000 false Bd3: 11602569-11603568 Brachypodium distachyon
Bradi3g12910 2.0kb upstream 2.0kb upstream 6119 true Bd3: 11603569-11609687 Brachypodium distachyon
Bradi3g12910 2.0kb upstream 2.0kb upstream 2000 false Bd3: 11607688-11609687 Brachypodium distachyon
Bradi3g12910 2.0kb downstream 2.0kb downstream 6119 true Bd3: 11601569-11607687 Brachypodium distachyon
Bradi3g12910 2.0kb downstream 2.0kb downstream 2000 false Bd3: 11601569-11603568 Brachypodium distachyon
Bradi3g12910 5.0kb upstream 5.0kb upstream 9119 true Bd3: 11603569-11612687 Brachypodium distachyon
Bradi3g12910 5.0kb upstream 5.0kb upstream 5000 false Bd3: 11607688-11612687 Brachypodium distachyon
Bradi3g12910 5.0kb downstream 5.0kb downstream 9119 true Bd3: 11598569-11607687 Brachypodium distachyon
Bradi3g12910 5.0kb downstream 5.0kb downstream 5000 false Bd3: 11598569-11603568 Brachypodium distachyon
Bradi3g12910 10.0kb upstream 10.0kb upstream 14119 true Bd3: 11603569-11617687 Brachypodium distachyon
Bradi3g12910 10.0kb upstream 10.0kb upstream 10000 false Bd3: 11607688-11617687 Brachypodium distachyon
Bradi3g12910 10.0kb downstream 10.0kb downstream 14119 true Bd3: 11593569-11607687 Brachypodium distachyon
Bradi3g12910 10.0kb downstream 10.0kb downstream 10000 false Bd3: 11593569-11603568 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578689 5269 Grass View MSA
122050648 5273 Angiosperm View MSA
121351416 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.776     High  
cufflinks 8.849        
cufflinks 10.302       High
cufflinks 8.746        
cufflinks 4.616       Low
cufflinks 7.964        
cufflinks 7.599        
cufflinks 7.965        
cufflinks 8.005        
cufflinks 9.367        
cufflinks 5.031       Low
cufflinks 7.271        
cufflinks 5.093        
cufflinks 4.763       Low
cufflinks 5.458        
cufflinks 9.094        
cufflinks 7.049        
cufflinks 5.793        
cufflinks 8.871        
cufflinks 2.182       Low
cufflinks 9.437        
cufflinks 9.626        
cufflinks 6.861        
cufflinks 7.483        
cufflinks 8.347        
cufflinks 10.057        
cufflinks 5.077       Low
cufflinks 10.407       High
cufflinks 9.856        
cufflinks 10.302       High

0 Strain