Gene : Bradi4g42120 B. distachyon v3.1
Defline:  (1 of 3) PTHR22952:SF208 - BZIP TRANSCRIPTION FACTOR-LIKE PROTEIN Genomic Order:  5422
Name:  ? Bradi4g42120 Secondary Identifier:  ? PAC:32783724
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g42120 0.5kb upstream 0.5kb upstream 2883 true Bd4: 46135471-46138353 Brachypodium distachyon
Bradi4g42120 0.5kb upstream 0.5kb upstream 500 false Bd4: 46137854-46138353 Brachypodium distachyon
Bradi4g42120 0.5kb downstream 0.5kb downstream 2883 true Bd4: 46134971-46137853 Brachypodium distachyon
Bradi4g42120 0.5kb downstream 0.5kb downstream 500 false Bd4: 46134971-46135470 Brachypodium distachyon
Bradi4g42120 1.0kb upstream 1.0kb upstream 3383 true Bd4: 46135471-46138853 Brachypodium distachyon
Bradi4g42120 1.0kb upstream 1.0kb upstream 1000 false Bd4: 46137854-46138853 Brachypodium distachyon
Bradi4g42120 1.0kb downstream 1.0kb downstream 3383 true Bd4: 46134471-46137853 Brachypodium distachyon
Bradi4g42120 1.0kb downstream 1.0kb downstream 1000 false Bd4: 46134471-46135470 Brachypodium distachyon
Bradi4g42120 2.0kb upstream 2.0kb upstream 4383 true Bd4: 46135471-46139853 Brachypodium distachyon
Bradi4g42120 2.0kb upstream 2.0kb upstream 2000 false Bd4: 46137854-46139853 Brachypodium distachyon
Bradi4g42120 2.0kb downstream 2.0kb downstream 4383 true Bd4: 46133471-46137853 Brachypodium distachyon
Bradi4g42120 2.0kb downstream 2.0kb downstream 2000 false Bd4: 46133471-46135470 Brachypodium distachyon
Bradi4g42120 5.0kb upstream 5.0kb upstream 7383 true Bd4: 46135471-46142853 Brachypodium distachyon
Bradi4g42120 5.0kb upstream 5.0kb upstream 5000 false Bd4: 46137854-46142853 Brachypodium distachyon
Bradi4g42120 5.0kb downstream 5.0kb downstream 7383 true Bd4: 46130471-46137853 Brachypodium distachyon
Bradi4g42120 5.0kb downstream 5.0kb downstream 5000 false Bd4: 46130471-46135470 Brachypodium distachyon
Bradi4g42120 10.0kb upstream 10.0kb upstream 12383 true Bd4: 46135471-46147853 Brachypodium distachyon
Bradi4g42120 10.0kb upstream 10.0kb upstream 10000 false Bd4: 46137854-46147853 Brachypodium distachyon
Bradi4g42120 10.0kb downstream 10.0kb downstream 12383 true Bd4: 46125471-46137853 Brachypodium distachyon
Bradi4g42120 10.0kb downstream 10.0kb downstream 10000 false Bd4: 46125471-46135470 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580085 5269 Grass View MSA
122047006 5273 Angiosperm View MSA
121351169 5274 Embryophyte View MSA
123425858 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.167     Low  
cufflinks 4.527       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain