Gene : Bradi4g41650 B. distachyon v3.1
Defline:  (1 of 1) PTHR13017:SF0 - METHENYLTETRAHYDROFOLATE SYNTHASE DOMAIN-CONTAINING PROTEIN Genomic Order:  5359
Name:  ? Bradi4g41650 Secondary Identifier:  ? PAC:32784940
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g41650 0.5kb upstream 0.5kb upstream 3805 true Bd4: 45627437-45631241 Brachypodium distachyon
Bradi4g41650 0.5kb upstream 0.5kb upstream 500 false Bd4: 45630742-45631241 Brachypodium distachyon
Bradi4g41650 0.5kb downstream 0.5kb downstream 3805 true Bd4: 45626937-45630741 Brachypodium distachyon
Bradi4g41650 0.5kb downstream 0.5kb downstream 500 false Bd4: 45626937-45627436 Brachypodium distachyon
Bradi4g41650 1.0kb upstream 1.0kb upstream 4305 true Bd4: 45627437-45631741 Brachypodium distachyon
Bradi4g41650 1.0kb upstream 1.0kb upstream 1000 false Bd4: 45630742-45631741 Brachypodium distachyon
Bradi4g41650 1.0kb downstream 1.0kb downstream 4305 true Bd4: 45626437-45630741 Brachypodium distachyon
Bradi4g41650 1.0kb downstream 1.0kb downstream 1000 false Bd4: 45626437-45627436 Brachypodium distachyon
Bradi4g41650 2.0kb upstream 2.0kb upstream 5305 true Bd4: 45627437-45632741 Brachypodium distachyon
Bradi4g41650 2.0kb upstream 2.0kb upstream 2000 false Bd4: 45630742-45632741 Brachypodium distachyon
Bradi4g41650 2.0kb downstream 2.0kb downstream 5305 true Bd4: 45625437-45630741 Brachypodium distachyon
Bradi4g41650 2.0kb downstream 2.0kb downstream 2000 false Bd4: 45625437-45627436 Brachypodium distachyon
Bradi4g41650 5.0kb upstream 5.0kb upstream 8305 true Bd4: 45627437-45635741 Brachypodium distachyon
Bradi4g41650 5.0kb upstream 5.0kb upstream 5000 false Bd4: 45630742-45635741 Brachypodium distachyon
Bradi4g41650 5.0kb downstream 5.0kb downstream 8305 true Bd4: 45622437-45630741 Brachypodium distachyon
Bradi4g41650 5.0kb downstream 5.0kb downstream 5000 false Bd4: 45622437-45627436 Brachypodium distachyon
Bradi4g41650 10.0kb upstream 10.0kb upstream 13305 true Bd4: 45627437-45640741 Brachypodium distachyon
Bradi4g41650 10.0kb upstream 10.0kb upstream 10000 false Bd4: 45630742-45640741 Brachypodium distachyon
Bradi4g41650 10.0kb downstream 10.0kb downstream 13305 true Bd4: 45617437-45630741 Brachypodium distachyon
Bradi4g41650 10.0kb downstream 10.0kb downstream 10000 false Bd4: 45617437-45627436 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577829 5269 Grass View MSA
122041848 5273 Angiosperm View MSA
121347845 5274 Embryophyte View MSA
123425281 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.329        
cufflinks 10.043        
cufflinks 10.688     High  
cufflinks 12.183     High High
cufflinks 5.539        
cufflinks 7.803        
cufflinks 9.057        
cufflinks 5.898        
cufflinks 6.688        
cufflinks 9.172        
cufflinks 10.589     High  
cufflinks 6.759        
cufflinks 8.517     High  
cufflinks 10.061     High  
cufflinks 6.999        
cufflinks 9.042        
cufflinks 7.106        
cufflinks 1.364       Low
cufflinks 3.183       Low
cufflinks 4.509        
cufflinks 6.109        
cufflinks 7.862        
cufflinks 6.301        
cufflinks 7.922        
cufflinks 10.049     High  
cufflinks 10.63        
cufflinks 9.212     High  
cufflinks 10.872     High  
cufflinks 11.107     High  
cufflinks 7.054        

0 Strain