Gene : Bradi3g13330 B. distachyon v3.1
Defline:  (1 of 1) PTHR11200//PTHR11200:SF136 - INOSITOL 5-PHOSPHATASE // PHOSPHOINOSITIDE PHOSPHATASE SAC1 Genomic Order:  1642
Name:  ? Bradi3g13330 Secondary Identifier:  ? PAC:32813998
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g13330 0.5kb upstream 0.5kb upstream 6827 true Bd3: 11839527-11846353 Brachypodium distachyon
Bradi3g13330 0.5kb upstream 0.5kb upstream 500 false Bd3: 11839527-11840026 Brachypodium distachyon
Bradi3g13330 0.5kb downstream 0.5kb downstream 6827 true Bd3: 11840027-11846853 Brachypodium distachyon
Bradi3g13330 0.5kb downstream 0.5kb downstream 500 false Bd3: 11846354-11846853 Brachypodium distachyon
Bradi3g13330 1.0kb upstream 1.0kb upstream 7327 true Bd3: 11839027-11846353 Brachypodium distachyon
Bradi3g13330 1.0kb upstream 1.0kb upstream 1000 false Bd3: 11839027-11840026 Brachypodium distachyon
Bradi3g13330 1.0kb downstream 1.0kb downstream 7327 true Bd3: 11840027-11847353 Brachypodium distachyon
Bradi3g13330 1.0kb downstream 1.0kb downstream 1000 false Bd3: 11846354-11847353 Brachypodium distachyon
Bradi3g13330 2.0kb upstream 2.0kb upstream 8327 true Bd3: 11838027-11846353 Brachypodium distachyon
Bradi3g13330 2.0kb upstream 2.0kb upstream 2000 false Bd3: 11838027-11840026 Brachypodium distachyon
Bradi3g13330 2.0kb downstream 2.0kb downstream 8327 true Bd3: 11840027-11848353 Brachypodium distachyon
Bradi3g13330 2.0kb downstream 2.0kb downstream 2000 false Bd3: 11846354-11848353 Brachypodium distachyon
Bradi3g13330 5.0kb upstream 5.0kb upstream 11327 true Bd3: 11835027-11846353 Brachypodium distachyon
Bradi3g13330 5.0kb upstream 5.0kb upstream 5000 false Bd3: 11835027-11840026 Brachypodium distachyon
Bradi3g13330 5.0kb downstream 5.0kb downstream 11327 true Bd3: 11840027-11851353 Brachypodium distachyon
Bradi3g13330 5.0kb downstream 5.0kb downstream 5000 false Bd3: 11846354-11851353 Brachypodium distachyon
Bradi3g13330 10.0kb upstream 10.0kb upstream 16327 true Bd3: 11830027-11846353 Brachypodium distachyon
Bradi3g13330 10.0kb upstream 10.0kb upstream 10000 false Bd3: 11830027-11840026 Brachypodium distachyon
Bradi3g13330 10.0kb downstream 10.0kb downstream 16327 true Bd3: 11840027-11856353 Brachypodium distachyon
Bradi3g13330 10.0kb downstream 10.0kb downstream 10000 false Bd3: 11846354-11856353 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570303 5269 Grass View MSA
122047437 5273 Angiosperm View MSA
121350498 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.751        
cufflinks 3.863        
cufflinks 5.556       High
cufflinks 2.801        
cufflinks 3.092        
cufflinks 3.549        
cufflinks 3.411        
cufflinks 2.877        
cufflinks 3.362        
cufflinks 3.899        
cufflinks 5.263       High
cufflinks 3.845        
cufflinks 4.628        
cufflinks 3.705        
cufflinks 3.057        
cufflinks 3.882        
cufflinks 2.454       Low
cufflinks 5.996       High
cufflinks 4.744        
cufflinks 2.515       Low
cufflinks 2.777        
cufflinks 6.52       High
cufflinks 2.9        
cufflinks 2.885        
cufflinks 2.722        
cufflinks 5.268       High
cufflinks 4.868        
cufflinks 5.64       High
cufflinks 5.305       High
cufflinks 3.796        

0 Strain