Gene : Bradi3g13710 B. distachyon v3.1
Defline:  (1 of 1) PTHR32295:SF0 - PROTEIN IQ-DOMAIN 17-RELATED Genomic Order:  1693
Name:  ? Bradi3g13710 Secondary Identifier:  ? PAC:32813353
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g13710 0.5kb upstream 0.5kb upstream 3855 true Bd3: 12207823-12211677 Brachypodium distachyon
Bradi3g13710 0.5kb upstream 0.5kb upstream 500 false Bd3: 12211178-12211677 Brachypodium distachyon
Bradi3g13710 0.5kb downstream 0.5kb downstream 3855 true Bd3: 12207323-12211177 Brachypodium distachyon
Bradi3g13710 0.5kb downstream 0.5kb downstream 500 false Bd3: 12207323-12207822 Brachypodium distachyon
Bradi3g13710 1.0kb upstream 1.0kb upstream 4355 true Bd3: 12207823-12212177 Brachypodium distachyon
Bradi3g13710 1.0kb upstream 1.0kb upstream 1000 false Bd3: 12211178-12212177 Brachypodium distachyon
Bradi3g13710 1.0kb downstream 1.0kb downstream 4355 true Bd3: 12206823-12211177 Brachypodium distachyon
Bradi3g13710 1.0kb downstream 1.0kb downstream 1000 false Bd3: 12206823-12207822 Brachypodium distachyon
Bradi3g13710 2.0kb upstream 2.0kb upstream 5355 true Bd3: 12207823-12213177 Brachypodium distachyon
Bradi3g13710 2.0kb upstream 2.0kb upstream 2000 false Bd3: 12211178-12213177 Brachypodium distachyon
Bradi3g13710 2.0kb downstream 2.0kb downstream 5355 true Bd3: 12205823-12211177 Brachypodium distachyon
Bradi3g13710 2.0kb downstream 2.0kb downstream 2000 false Bd3: 12205823-12207822 Brachypodium distachyon
Bradi3g13710 5.0kb upstream 5.0kb upstream 8355 true Bd3: 12207823-12216177 Brachypodium distachyon
Bradi3g13710 5.0kb upstream 5.0kb upstream 5000 false Bd3: 12211178-12216177 Brachypodium distachyon
Bradi3g13710 5.0kb downstream 5.0kb downstream 8355 true Bd3: 12202823-12211177 Brachypodium distachyon
Bradi3g13710 5.0kb downstream 5.0kb downstream 5000 false Bd3: 12202823-12207822 Brachypodium distachyon
Bradi3g13710 10.0kb upstream 10.0kb upstream 13355 true Bd3: 12207823-12221177 Brachypodium distachyon
Bradi3g13710 10.0kb upstream 10.0kb upstream 10000 false Bd3: 12211178-12221177 Brachypodium distachyon
Bradi3g13710 10.0kb downstream 10.0kb downstream 13355 true Bd3: 12197823-12211177 Brachypodium distachyon
Bradi3g13710 10.0kb downstream 10.0kb downstream 10000 false Bd3: 12197823-12207822 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575863 5269 Grass View MSA
122042835 5273 Angiosperm View MSA
121351537 5274 Embryophyte View MSA
123382213 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.989        
cufflinks 1.148        
cufflinks 1.14        
cufflinks 1.374        
cufflinks 0.283        
cufflinks 1.114        
cufflinks 1.289        
cufflinks 0.865        
cufflinks 1.168        
cufflinks 1.421        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.583        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.084       Low
cufflinks 1.068        
cufflinks 0.994        
cufflinks 2.381        
cufflinks 0.981        
cufflinks 0.389        
cufflinks 1.116        
cufflinks 0.964        
cufflinks 0.838        
cufflinks 0.817        
cufflinks 1.337        
cufflinks 1.107        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.406        
cufflinks 1.119        
cufflinks 1.536        

0 Strain