Gene : Bradi3g13727 B. distachyon v3.1
Defline:  (1 of 1) PTHR31989:SF39 - NAC DOMAIN-CONTAINING PROTEIN 12 Genomic Order:  1696
Name:  ? Bradi3g13727 Secondary Identifier:  ? PAC:32823293
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g13727 0.5kb upstream 0.5kb upstream 3131 true Bd3: 12241609-12244739 Brachypodium distachyon
Bradi3g13727 0.5kb upstream 0.5kb upstream 500 false Bd3: 12241609-12242108 Brachypodium distachyon
Bradi3g13727 0.5kb downstream 0.5kb downstream 3131 true Bd3: 12242109-12245239 Brachypodium distachyon
Bradi3g13727 0.5kb downstream 0.5kb downstream 500 false Bd3: 12244740-12245239 Brachypodium distachyon
Bradi3g13727 1.0kb upstream 1.0kb upstream 3631 true Bd3: 12241109-12244739 Brachypodium distachyon
Bradi3g13727 1.0kb upstream 1.0kb upstream 1000 false Bd3: 12241109-12242108 Brachypodium distachyon
Bradi3g13727 1.0kb downstream 1.0kb downstream 3631 true Bd3: 12242109-12245739 Brachypodium distachyon
Bradi3g13727 1.0kb downstream 1.0kb downstream 1000 false Bd3: 12244740-12245739 Brachypodium distachyon
Bradi3g13727 2.0kb upstream 2.0kb upstream 4631 true Bd3: 12240109-12244739 Brachypodium distachyon
Bradi3g13727 2.0kb upstream 2.0kb upstream 2000 false Bd3: 12240109-12242108 Brachypodium distachyon
Bradi3g13727 2.0kb downstream 2.0kb downstream 4631 true Bd3: 12242109-12246739 Brachypodium distachyon
Bradi3g13727 2.0kb downstream 2.0kb downstream 2000 false Bd3: 12244740-12246739 Brachypodium distachyon
Bradi3g13727 5.0kb upstream 5.0kb upstream 7631 true Bd3: 12237109-12244739 Brachypodium distachyon
Bradi3g13727 5.0kb upstream 5.0kb upstream 5000 false Bd3: 12237109-12242108 Brachypodium distachyon
Bradi3g13727 5.0kb downstream 5.0kb downstream 7631 true Bd3: 12242109-12249739 Brachypodium distachyon
Bradi3g13727 5.0kb downstream 5.0kb downstream 5000 false Bd3: 12244740-12249739 Brachypodium distachyon
Bradi3g13727 10.0kb upstream 10.0kb upstream 12631 true Bd3: 12232109-12244739 Brachypodium distachyon
Bradi3g13727 10.0kb upstream 10.0kb upstream 10000 false Bd3: 12232109-12242108 Brachypodium distachyon
Bradi3g13727 10.0kb downstream 10.0kb downstream 12631 true Bd3: 12242109-12254739 Brachypodium distachyon
Bradi3g13727 10.0kb downstream 10.0kb downstream 10000 false Bd3: 12244740-12254739 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579736 5269 Grass View MSA
122049306 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.618        
cufflinks 3.312        
cufflinks 3.236        
cufflinks 3.231        
cufflinks 2.367        
cufflinks 2.581        
cufflinks 3.615        
cufflinks 2.978        
cufflinks 3.228        
cufflinks 2.517        
cufflinks 0.073       Low
cufflinks 2.537        
cufflinks 0.518       Low
cufflinks 0.097       Low
cufflinks 2.558        
cufflinks 2.118        
cufflinks 5.585        
cufflinks 5.251        
cufflinks 4.076        
cufflinks 0.162       Low
cufflinks 19.364     High High
cufflinks 2.209        
cufflinks 3.233        
cufflinks 3.486        
cufflinks 3.264        
cufflinks 2.717        
cufflinks 0.294       Low
cufflinks 2.871        
cufflinks 2.808        
cufflinks 12.753     High High

0 Strain