Gene : Bradi3g14090 B. distachyon v3.1
Defline:  (1 of 1) PTHR10257//PTHR10257:SF17 - SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B // SUBFAMILY NOT NAMED Genomic Order:  1744
Name:  ? Bradi3g14090 Secondary Identifier:  ? PAC:32820209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g14090 0.5kb upstream 0.5kb upstream 5705 true Bd3: 12533514-12539218 Brachypodium distachyon
Bradi3g14090 0.5kb upstream 0.5kb upstream 500 false Bd3: 12538719-12539218 Brachypodium distachyon
Bradi3g14090 0.5kb downstream 0.5kb downstream 5705 true Bd3: 12533014-12538718 Brachypodium distachyon
Bradi3g14090 0.5kb downstream 0.5kb downstream 500 false Bd3: 12533014-12533513 Brachypodium distachyon
Bradi3g14090 1.0kb upstream 1.0kb upstream 6205 true Bd3: 12533514-12539718 Brachypodium distachyon
Bradi3g14090 1.0kb upstream 1.0kb upstream 1000 false Bd3: 12538719-12539718 Brachypodium distachyon
Bradi3g14090 1.0kb downstream 1.0kb downstream 6205 true Bd3: 12532514-12538718 Brachypodium distachyon
Bradi3g14090 1.0kb downstream 1.0kb downstream 1000 false Bd3: 12532514-12533513 Brachypodium distachyon
Bradi3g14090 2.0kb upstream 2.0kb upstream 7205 true Bd3: 12533514-12540718 Brachypodium distachyon
Bradi3g14090 2.0kb upstream 2.0kb upstream 2000 false Bd3: 12538719-12540718 Brachypodium distachyon
Bradi3g14090 2.0kb downstream 2.0kb downstream 7205 true Bd3: 12531514-12538718 Brachypodium distachyon
Bradi3g14090 2.0kb downstream 2.0kb downstream 2000 false Bd3: 12531514-12533513 Brachypodium distachyon
Bradi3g14090 5.0kb upstream 5.0kb upstream 10205 true Bd3: 12533514-12543718 Brachypodium distachyon
Bradi3g14090 5.0kb upstream 5.0kb upstream 5000 false Bd3: 12538719-12543718 Brachypodium distachyon
Bradi3g14090 5.0kb downstream 5.0kb downstream 10205 true Bd3: 12528514-12538718 Brachypodium distachyon
Bradi3g14090 5.0kb downstream 5.0kb downstream 5000 false Bd3: 12528514-12533513 Brachypodium distachyon
Bradi3g14090 10.0kb upstream 10.0kb upstream 15205 true Bd3: 12533514-12548718 Brachypodium distachyon
Bradi3g14090 10.0kb upstream 10.0kb upstream 10000 false Bd3: 12538719-12548718 Brachypodium distachyon
Bradi3g14090 10.0kb downstream 10.0kb downstream 15205 true Bd3: 12523514-12538718 Brachypodium distachyon
Bradi3g14090 10.0kb downstream 10.0kb downstream 10000 false Bd3: 12523514-12533513 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574932 5269 Grass View MSA
122044522 5273 Angiosperm View MSA
121346157 5274 Embryophyte View MSA
123427992 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.847     High  
cufflinks 10.7     High  
cufflinks 14.464     High  
cufflinks 9.431       Low
cufflinks 10.452     High  
cufflinks 10.518     High  
cufflinks 9.133       Low
cufflinks 13.281     High  
cufflinks 12.346     High  
cufflinks 19.768     High High
cufflinks 23.548     High High
cufflinks 16.215     High  
cufflinks 19.728     High High
cufflinks 18.456     High  
cufflinks 18.703     High  
cufflinks 10.322     High  
cufflinks 13.54     High  
cufflinks 18.4     High  
cufflinks 12.182        
cufflinks 13.796     High  
cufflinks 13.179     High  
cufflinks 22.601     High High
cufflinks 14.569     High  
cufflinks 12.326     High  
cufflinks 9.968     High Low
cufflinks 14.154     High  
cufflinks 25.12     High High
cufflinks 16.285     High  
cufflinks 18.464     High  
cufflinks 14.136     High  

0 Strain