Gene : Bradi3g14120 B. distachyon v3.1
Defline:  (1 of 3) PTHR10836//PTHR10836:SF58 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  1748
Name:  ? Bradi3g14120 Secondary Identifier:  ? PAC:32818880
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon ANAEROFRUCAT-PWY Brachypodium distachyon pathologic  
Bdistachyon ANAGLYCOLYSIS-PWY Brachypodium distachyon pathologic  
Bdistachyon GLUCONEO-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-1042 Brachypodium distachyon pathologic  
Bdistachyon PWY-5464 Brachypodium distachyon pathologic  
Bdistachyon SUCSYN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g14120 0.5kb upstream 0.5kb upstream 4658 true Bd3: 12575055-12579712 Brachypodium distachyon
Bradi3g14120 0.5kb upstream 0.5kb upstream 500 false Bd3: 12575055-12575554 Brachypodium distachyon
Bradi3g14120 0.5kb downstream 0.5kb downstream 4658 true Bd3: 12575555-12580212 Brachypodium distachyon
Bradi3g14120 0.5kb downstream 0.5kb downstream 500 false Bd3: 12579713-12580212 Brachypodium distachyon
Bradi3g14120 1.0kb upstream 1.0kb upstream 5158 true Bd3: 12574555-12579712 Brachypodium distachyon
Bradi3g14120 1.0kb upstream 1.0kb upstream 1000 false Bd3: 12574555-12575554 Brachypodium distachyon
Bradi3g14120 1.0kb downstream 1.0kb downstream 5158 true Bd3: 12575555-12580712 Brachypodium distachyon
Bradi3g14120 1.0kb downstream 1.0kb downstream 1000 false Bd3: 12579713-12580712 Brachypodium distachyon
Bradi3g14120 2.0kb upstream 2.0kb upstream 6158 true Bd3: 12573555-12579712 Brachypodium distachyon
Bradi3g14120 2.0kb upstream 2.0kb upstream 2000 false Bd3: 12573555-12575554 Brachypodium distachyon
Bradi3g14120 2.0kb downstream 2.0kb downstream 6158 true Bd3: 12575555-12581712 Brachypodium distachyon
Bradi3g14120 2.0kb downstream 2.0kb downstream 2000 false Bd3: 12579713-12581712 Brachypodium distachyon
Bradi3g14120 5.0kb upstream 5.0kb upstream 9158 true Bd3: 12570555-12579712 Brachypodium distachyon
Bradi3g14120 5.0kb upstream 5.0kb upstream 5000 false Bd3: 12570555-12575554 Brachypodium distachyon
Bradi3g14120 5.0kb downstream 5.0kb downstream 9158 true Bd3: 12575555-12584712 Brachypodium distachyon
Bradi3g14120 5.0kb downstream 5.0kb downstream 5000 false Bd3: 12579713-12584712 Brachypodium distachyon
Bradi3g14120 10.0kb upstream 10.0kb upstream 14158 true Bd3: 12565555-12579712 Brachypodium distachyon
Bradi3g14120 10.0kb upstream 10.0kb upstream 10000 false Bd3: 12565555-12575554 Brachypodium distachyon
Bradi3g14120 10.0kb downstream 10.0kb downstream 14158 true Bd3: 12575555-12589712 Brachypodium distachyon
Bradi3g14120 10.0kb downstream 10.0kb downstream 10000 false Bd3: 12579713-12589712 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589376 5269 Grass View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 238.451     High  
cufflinks 237.165     High  
cufflinks 245.82     High  
cufflinks 210.638     High  
cufflinks 247.107     High  
cufflinks 206.271     High  
cufflinks 229.529     High  
cufflinks 227.387     High  
cufflinks 211.647     High  
cufflinks 137.527     High  
cufflinks 141.074     High  
cufflinks 236.128     High  
cufflinks 90.395     High Low
cufflinks 99.645     High Low
cufflinks 178.51     High  
cufflinks 295.562     High  
cufflinks 306.831     High  
cufflinks 942.293     High High
cufflinks 475.861     High High
cufflinks 203.582     High  
cufflinks 383.974     High  
cufflinks 212.387     High  
cufflinks 236.498     High  
cufflinks 217.779     High  
cufflinks 190.191     High  
cufflinks 183.957     High  
cufflinks 91.762     High Low
cufflinks 173.499     High  
cufflinks 183.216     High  
cufflinks 392.455     High  

0 Strain