Gene : Bradi3g14181 B. distachyon v3.1
Defline:  (1 of 1) PTHR33372:SF1 - CHLOROPLAST J-LIKE DOMAIN 1-CONTAINING PROTEIN Genomic Order:  1755
Name:  ? Bradi3g14181 Secondary Identifier:  ? PAC:32823656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g14181 0.5kb upstream 0.5kb upstream 4354 true Bd3: 12632143-12636496 Brachypodium distachyon
Bradi3g14181 0.5kb upstream 0.5kb upstream 500 false Bd3: 12635997-12636496 Brachypodium distachyon
Bradi3g14181 0.5kb downstream 0.5kb downstream 4354 true Bd3: 12631643-12635996 Brachypodium distachyon
Bradi3g14181 0.5kb downstream 0.5kb downstream 500 false Bd3: 12631643-12632142 Brachypodium distachyon
Bradi3g14181 1.0kb upstream 1.0kb upstream 4854 true Bd3: 12632143-12636996 Brachypodium distachyon
Bradi3g14181 1.0kb upstream 1.0kb upstream 1000 false Bd3: 12635997-12636996 Brachypodium distachyon
Bradi3g14181 1.0kb downstream 1.0kb downstream 4854 true Bd3: 12631143-12635996 Brachypodium distachyon
Bradi3g14181 1.0kb downstream 1.0kb downstream 1000 false Bd3: 12631143-12632142 Brachypodium distachyon
Bradi3g14181 2.0kb upstream 2.0kb upstream 5854 true Bd3: 12632143-12637996 Brachypodium distachyon
Bradi3g14181 2.0kb upstream 2.0kb upstream 2000 false Bd3: 12635997-12637996 Brachypodium distachyon
Bradi3g14181 2.0kb downstream 2.0kb downstream 5854 true Bd3: 12630143-12635996 Brachypodium distachyon
Bradi3g14181 2.0kb downstream 2.0kb downstream 2000 false Bd3: 12630143-12632142 Brachypodium distachyon
Bradi3g14181 5.0kb upstream 5.0kb upstream 8854 true Bd3: 12632143-12640996 Brachypodium distachyon
Bradi3g14181 5.0kb upstream 5.0kb upstream 5000 false Bd3: 12635997-12640996 Brachypodium distachyon
Bradi3g14181 5.0kb downstream 5.0kb downstream 8854 true Bd3: 12627143-12635996 Brachypodium distachyon
Bradi3g14181 5.0kb downstream 5.0kb downstream 5000 false Bd3: 12627143-12632142 Brachypodium distachyon
Bradi3g14181 10.0kb upstream 10.0kb upstream 13854 true Bd3: 12632143-12645996 Brachypodium distachyon
Bradi3g14181 10.0kb upstream 10.0kb upstream 10000 false Bd3: 12635997-12645996 Brachypodium distachyon
Bradi3g14181 10.0kb downstream 10.0kb downstream 13854 true Bd3: 12622143-12635996 Brachypodium distachyon
Bradi3g14181 10.0kb downstream 10.0kb downstream 10000 false Bd3: 12622143-12632142 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588818 5269 Grass View MSA
122045556 5273 Angiosperm View MSA
121344488 5274 Embryophyte View MSA
123428806 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.644     High  
cufflinks 22.162     High High
cufflinks 18.287     High  
cufflinks 23.491     High High
cufflinks 11.181     High  
cufflinks 17.714     High  
cufflinks 19.462     High  
cufflinks 14.574     High  
cufflinks 15.716     High  
cufflinks 19.322     High  
cufflinks 7.333       Low
cufflinks 14.211     High  
cufflinks 7.223       Low
cufflinks 8.535     High  
cufflinks 11.84     High  
cufflinks 19.524     High  
cufflinks 20.453     High  
cufflinks 5.711       Low
cufflinks 14.242     High  
cufflinks 2.7       Low
cufflinks 15.445     High  
cufflinks 15.881     High  
cufflinks 12.311     High  
cufflinks 14.452     High  
cufflinks 20.713     High  
cufflinks 20.409     High  
cufflinks 5.606       Low
cufflinks 19.987     High  
cufflinks 17.112     High  
cufflinks 18.022     High  

0 Strain