Gene : Bradi3g14190 B. distachyon v3.1
Defline:  (1 of 1) PTHR12942 - STEP II SPLICING FACTOR SLU7 Genomic Order:  1756
Name:  ? Bradi3g14190 Secondary Identifier:  ? PAC:32814634
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g14190 0.5kb upstream 0.5kb upstream 4375 true Bd3: 12635714-12640088 Brachypodium distachyon
Bradi3g14190 0.5kb upstream 0.5kb upstream 500 false Bd3: 12635714-12636213 Brachypodium distachyon
Bradi3g14190 0.5kb downstream 0.5kb downstream 4375 true Bd3: 12636214-12640588 Brachypodium distachyon
Bradi3g14190 0.5kb downstream 0.5kb downstream 500 false Bd3: 12640089-12640588 Brachypodium distachyon
Bradi3g14190 1.0kb upstream 1.0kb upstream 4875 true Bd3: 12635214-12640088 Brachypodium distachyon
Bradi3g14190 1.0kb upstream 1.0kb upstream 1000 false Bd3: 12635214-12636213 Brachypodium distachyon
Bradi3g14190 1.0kb downstream 1.0kb downstream 4875 true Bd3: 12636214-12641088 Brachypodium distachyon
Bradi3g14190 1.0kb downstream 1.0kb downstream 1000 false Bd3: 12640089-12641088 Brachypodium distachyon
Bradi3g14190 2.0kb upstream 2.0kb upstream 5875 true Bd3: 12634214-12640088 Brachypodium distachyon
Bradi3g14190 2.0kb upstream 2.0kb upstream 2000 false Bd3: 12634214-12636213 Brachypodium distachyon
Bradi3g14190 2.0kb downstream 2.0kb downstream 5875 true Bd3: 12636214-12642088 Brachypodium distachyon
Bradi3g14190 2.0kb downstream 2.0kb downstream 2000 false Bd3: 12640089-12642088 Brachypodium distachyon
Bradi3g14190 5.0kb upstream 5.0kb upstream 8875 true Bd3: 12631214-12640088 Brachypodium distachyon
Bradi3g14190 5.0kb upstream 5.0kb upstream 5000 false Bd3: 12631214-12636213 Brachypodium distachyon
Bradi3g14190 5.0kb downstream 5.0kb downstream 8875 true Bd3: 12636214-12645088 Brachypodium distachyon
Bradi3g14190 5.0kb downstream 5.0kb downstream 5000 false Bd3: 12640089-12645088 Brachypodium distachyon
Bradi3g14190 10.0kb upstream 10.0kb upstream 13875 true Bd3: 12626214-12640088 Brachypodium distachyon
Bradi3g14190 10.0kb upstream 10.0kb upstream 10000 false Bd3: 12626214-12636213 Brachypodium distachyon
Bradi3g14190 10.0kb downstream 10.0kb downstream 13875 true Bd3: 12636214-12650088 Brachypodium distachyon
Bradi3g14190 10.0kb downstream 10.0kb downstream 10000 false Bd3: 12640089-12650088 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576110 5269 Grass View MSA
122043272 5273 Angiosperm View MSA
121344564 5274 Embryophyte View MSA
123424269 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.512     High  
cufflinks 30.054     High Low
cufflinks 37.705     High  
cufflinks 28.647     High Low
cufflinks 39.626     High  
cufflinks 31.458     High  
cufflinks 28.312     High Low
cufflinks 33.396     High  
cufflinks 31.765     High  
cufflinks 40.13     High  
cufflinks 42.627     High  
cufflinks 38.196     High  
cufflinks 36.454     High  
cufflinks 34.314     High  
cufflinks 43.527     High  
cufflinks 31.228     High  
cufflinks 35.056     High  
cufflinks 41.584     High  
cufflinks 41.231     High  
cufflinks 55.493     High High
cufflinks 35.989     High  
cufflinks 43.429     High  
cufflinks 33.902     High  
cufflinks 31.11     High Low
cufflinks 29.632     High Low
cufflinks 37.546     High  
cufflinks 43.455     High  
cufflinks 39.676     High  
cufflinks 38.565     High  
cufflinks 40.715     High  

0 Strain