Gene : Bradi3g14340 B. distachyon v3.1
Defline:  (1 of 3) PTHR21141:SF3 - 60S ACIDIC RIBOSOMAL PROTEIN P0 Genomic Order:  1777
Name:  ? Bradi3g14340 Secondary Identifier:  ? PAC:32813239
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g14340 0.5kb upstream 0.5kb upstream 3191 true Bd3: 12789161-12792351 Brachypodium distachyon
Bradi3g14340 0.5kb upstream 0.5kb upstream 500 false Bd3: 12791852-12792351 Brachypodium distachyon
Bradi3g14340 0.5kb downstream 0.5kb downstream 3191 true Bd3: 12788661-12791851 Brachypodium distachyon
Bradi3g14340 0.5kb downstream 0.5kb downstream 500 false Bd3: 12788661-12789160 Brachypodium distachyon
Bradi3g14340 1.0kb upstream 1.0kb upstream 3691 true Bd3: 12789161-12792851 Brachypodium distachyon
Bradi3g14340 1.0kb upstream 1.0kb upstream 1000 false Bd3: 12791852-12792851 Brachypodium distachyon
Bradi3g14340 1.0kb downstream 1.0kb downstream 3691 true Bd3: 12788161-12791851 Brachypodium distachyon
Bradi3g14340 1.0kb downstream 1.0kb downstream 1000 false Bd3: 12788161-12789160 Brachypodium distachyon
Bradi3g14340 2.0kb upstream 2.0kb upstream 4691 true Bd3: 12789161-12793851 Brachypodium distachyon
Bradi3g14340 2.0kb upstream 2.0kb upstream 2000 false Bd3: 12791852-12793851 Brachypodium distachyon
Bradi3g14340 2.0kb downstream 2.0kb downstream 4691 true Bd3: 12787161-12791851 Brachypodium distachyon
Bradi3g14340 2.0kb downstream 2.0kb downstream 2000 false Bd3: 12787161-12789160 Brachypodium distachyon
Bradi3g14340 5.0kb upstream 5.0kb upstream 7691 true Bd3: 12789161-12796851 Brachypodium distachyon
Bradi3g14340 5.0kb upstream 5.0kb upstream 5000 false Bd3: 12791852-12796851 Brachypodium distachyon
Bradi3g14340 5.0kb downstream 5.0kb downstream 7691 true Bd3: 12784161-12791851 Brachypodium distachyon
Bradi3g14340 5.0kb downstream 5.0kb downstream 5000 false Bd3: 12784161-12789160 Brachypodium distachyon
Bradi3g14340 10.0kb upstream 10.0kb upstream 12691 true Bd3: 12789161-12801851 Brachypodium distachyon
Bradi3g14340 10.0kb upstream 10.0kb upstream 10000 false Bd3: 12791852-12801851 Brachypodium distachyon
Bradi3g14340 10.0kb downstream 10.0kb downstream 12691 true Bd3: 12779161-12791851 Brachypodium distachyon
Bradi3g14340 10.0kb downstream 10.0kb downstream 10000 false Bd3: 12779161-12789160 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582376 5269 Grass View MSA
122042027 5273 Angiosperm View MSA
121345246 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 176.03     High  
cufflinks 201.031     High  
cufflinks 177.299     High  
cufflinks 150.349     High  
cufflinks 92.586     High  
cufflinks 182.202     High  
cufflinks 197.409     High  
cufflinks 158.65     High  
cufflinks 172.62     High  
cufflinks 99.491     High  
cufflinks 34.462     High Low
cufflinks 160.013     High  
cufflinks 25.159     High Low
cufflinks 28.448     High Low
cufflinks 67.689     High  
cufflinks 235.313     High High
cufflinks 194.165     High  
cufflinks 414.436     High High
cufflinks 164.016     High  
cufflinks 32.911     High Low
cufflinks 160.501     High  
cufflinks 139.525     High  
cufflinks 126.864     High  
cufflinks 125.654     High  
cufflinks 145.89     High  
cufflinks 117.012     High  
cufflinks 31.538     High Low
cufflinks 109.7     High  
cufflinks 119.543     High  
cufflinks 220.289     High  

0 Strain