Gene : Bradi3g14658 B. distachyon v3.1
Defline:  (1 of 1) PTHR22849//PTHR22849:SF32 - WDSAM1 PROTEIN Genomic Order:  1812
Name:  ? Bradi3g14658 Secondary Identifier:  ? PAC:32815052
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7511 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g14658 0.5kb upstream 0.5kb upstream 1556 true Bd3: 13022520-13024075 Brachypodium distachyon
Bradi3g14658 0.5kb upstream 0.5kb upstream 500 false Bd3: 13023576-13024075 Brachypodium distachyon
Bradi3g14658 0.5kb downstream 0.5kb downstream 1556 true Bd3: 13022020-13023575 Brachypodium distachyon
Bradi3g14658 0.5kb downstream 0.5kb downstream 500 false Bd3: 13022020-13022519 Brachypodium distachyon
Bradi3g14658 1.0kb upstream 1.0kb upstream 2056 true Bd3: 13022520-13024575 Brachypodium distachyon
Bradi3g14658 1.0kb upstream 1.0kb upstream 1000 false Bd3: 13023576-13024575 Brachypodium distachyon
Bradi3g14658 1.0kb downstream 1.0kb downstream 2056 true Bd3: 13021520-13023575 Brachypodium distachyon
Bradi3g14658 1.0kb downstream 1.0kb downstream 1000 false Bd3: 13021520-13022519 Brachypodium distachyon
Bradi3g14658 2.0kb upstream 2.0kb upstream 3056 true Bd3: 13022520-13025575 Brachypodium distachyon
Bradi3g14658 2.0kb upstream 2.0kb upstream 2000 false Bd3: 13023576-13025575 Brachypodium distachyon
Bradi3g14658 2.0kb downstream 2.0kb downstream 3056 true Bd3: 13020520-13023575 Brachypodium distachyon
Bradi3g14658 2.0kb downstream 2.0kb downstream 2000 false Bd3: 13020520-13022519 Brachypodium distachyon
Bradi3g14658 5.0kb upstream 5.0kb upstream 6056 true Bd3: 13022520-13028575 Brachypodium distachyon
Bradi3g14658 5.0kb upstream 5.0kb upstream 5000 false Bd3: 13023576-13028575 Brachypodium distachyon
Bradi3g14658 5.0kb downstream 5.0kb downstream 6056 true Bd3: 13017520-13023575 Brachypodium distachyon
Bradi3g14658 5.0kb downstream 5.0kb downstream 5000 false Bd3: 13017520-13022519 Brachypodium distachyon
Bradi3g14658 10.0kb upstream 10.0kb upstream 11056 true Bd3: 13022520-13033575 Brachypodium distachyon
Bradi3g14658 10.0kb upstream 10.0kb upstream 10000 false Bd3: 13023576-13033575 Brachypodium distachyon
Bradi3g14658 10.0kb downstream 10.0kb downstream 11056 true Bd3: 13012520-13023575 Brachypodium distachyon
Bradi3g14658 10.0kb downstream 10.0kb downstream 10000 false Bd3: 13012520-13022519 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572539 5269 Grass View MSA
122041968 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.397        
cufflinks 3.946       Low
cufflinks 5.263        
cufflinks 5.691        
cufflinks 13.039     High High
cufflinks 6.035        
cufflinks 5.385        
cufflinks 7.337        
cufflinks 7.284        
cufflinks 10.36     High High
cufflinks 12.14     High High
cufflinks 6.247        
cufflinks 13.222     High High
cufflinks 9.195     High  
cufflinks 12.24     High High
cufflinks 6.527        
cufflinks 8.695        
cufflinks 5.841        
cufflinks 11.187       High
cufflinks 5.852        
cufflinks 7.053        
cufflinks 8.704        
cufflinks 7.851        
cufflinks 8.339        
cufflinks 8.04        
cufflinks 5.853        
cufflinks 13.573     High High
cufflinks 6.817        
cufflinks 6.797        
cufflinks 7.999        

0 Strain