Gene : Bradi3g10320 B. distachyon v3.1
Defline:  (1 of 1) K08959 - casein kinase 1, delta (CSNK1D) Genomic Order:  1330
Name:  ? Bradi3g10320 Secondary Identifier:  ? PAC:32816068
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g10320 0.5kb upstream 0.5kb upstream 9898 true Bd3: 8510651-8520548 Brachypodium distachyon
Bradi3g10320 0.5kb upstream 0.5kb upstream 500 false Bd3: 8510651-8511150 Brachypodium distachyon
Bradi3g10320 0.5kb downstream 0.5kb downstream 9898 true Bd3: 8511151-8521048 Brachypodium distachyon
Bradi3g10320 0.5kb downstream 0.5kb downstream 500 false Bd3: 8520549-8521048 Brachypodium distachyon
Bradi3g10320 1.0kb upstream 1.0kb upstream 10398 true Bd3: 8510151-8520548 Brachypodium distachyon
Bradi3g10320 1.0kb upstream 1.0kb upstream 1000 false Bd3: 8510151-8511150 Brachypodium distachyon
Bradi3g10320 1.0kb downstream 1.0kb downstream 10398 true Bd3: 8511151-8521548 Brachypodium distachyon
Bradi3g10320 1.0kb downstream 1.0kb downstream 1000 false Bd3: 8520549-8521548 Brachypodium distachyon
Bradi3g10320 2.0kb upstream 2.0kb upstream 11398 true Bd3: 8509151-8520548 Brachypodium distachyon
Bradi3g10320 2.0kb upstream 2.0kb upstream 2000 false Bd3: 8509151-8511150 Brachypodium distachyon
Bradi3g10320 2.0kb downstream 2.0kb downstream 11398 true Bd3: 8511151-8522548 Brachypodium distachyon
Bradi3g10320 2.0kb downstream 2.0kb downstream 2000 false Bd3: 8520549-8522548 Brachypodium distachyon
Bradi3g10320 5.0kb upstream 5.0kb upstream 14398 true Bd3: 8506151-8520548 Brachypodium distachyon
Bradi3g10320 5.0kb upstream 5.0kb upstream 5000 false Bd3: 8506151-8511150 Brachypodium distachyon
Bradi3g10320 5.0kb downstream 5.0kb downstream 14398 true Bd3: 8511151-8525548 Brachypodium distachyon
Bradi3g10320 5.0kb downstream 5.0kb downstream 5000 false Bd3: 8520549-8525548 Brachypodium distachyon
Bradi3g10320 10.0kb upstream 10.0kb upstream 19398 true Bd3: 8501151-8520548 Brachypodium distachyon
Bradi3g10320 10.0kb upstream 10.0kb upstream 10000 false Bd3: 8501151-8511150 Brachypodium distachyon
Bradi3g10320 10.0kb downstream 10.0kb downstream 19398 true Bd3: 8511151-8530548 Brachypodium distachyon
Bradi3g10320 10.0kb downstream 10.0kb downstream 10000 false Bd3: 8520549-8530548 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571062 5269 Grass View MSA
122041934 5273 Angiosperm View MSA
121349528 5274 Embryophyte View MSA
123427595 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.475        
cufflinks 3.193        
cufflinks 3.395        
cufflinks 3.131        
cufflinks 1.981       Low
cufflinks 2.773        
cufflinks 2.674        
cufflinks 3.342        
cufflinks 2.67        
cufflinks 3.018        
cufflinks 3.868       High
cufflinks 4.09       High
cufflinks 3.167        
cufflinks 2.884        
cufflinks 3.742       High
cufflinks 2.908        
cufflinks 2.128       Low
cufflinks 3.952       High
cufflinks 2.63        
cufflinks 2.131       Low
cufflinks 2.285        
cufflinks 3.661        
cufflinks 3.186        
cufflinks 2.781        
cufflinks 2.601        
cufflinks 3.8       High
cufflinks 3.967       High
cufflinks 3.507        
cufflinks 3.524        
cufflinks 2.607        

0 Strain