Gene : Bradi4g42997 B. distachyon v3.1
Defline:  (1 of 2) 2.4.1.116 - Cyanidin 3-O-rutinoside 5-O-glucosyltransferase / glucosyltransferase Genomic Order:  5545
Name:  ? Bradi4g42997 Secondary Identifier:  ? PAC:32783039
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5139 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g42997 0.5kb upstream 0.5kb upstream 2531 true Bd4: 46771438-46773968 Brachypodium distachyon
Bradi4g42997 0.5kb upstream 0.5kb upstream 500 false Bd4: 46771438-46771937 Brachypodium distachyon
Bradi4g42997 0.5kb downstream 0.5kb downstream 2531 true Bd4: 46771938-46774468 Brachypodium distachyon
Bradi4g42997 0.5kb downstream 0.5kb downstream 500 false Bd4: 46773969-46774468 Brachypodium distachyon
Bradi4g42997 1.0kb upstream 1.0kb upstream 3031 true Bd4: 46770938-46773968 Brachypodium distachyon
Bradi4g42997 1.0kb upstream 1.0kb upstream 1000 false Bd4: 46770938-46771937 Brachypodium distachyon
Bradi4g42997 1.0kb downstream 1.0kb downstream 3031 true Bd4: 46771938-46774968 Brachypodium distachyon
Bradi4g42997 1.0kb downstream 1.0kb downstream 1000 false Bd4: 46773969-46774968 Brachypodium distachyon
Bradi4g42997 2.0kb upstream 2.0kb upstream 4031 true Bd4: 46769938-46773968 Brachypodium distachyon
Bradi4g42997 2.0kb upstream 2.0kb upstream 2000 false Bd4: 46769938-46771937 Brachypodium distachyon
Bradi4g42997 2.0kb downstream 2.0kb downstream 4031 true Bd4: 46771938-46775968 Brachypodium distachyon
Bradi4g42997 2.0kb downstream 2.0kb downstream 2000 false Bd4: 46773969-46775968 Brachypodium distachyon
Bradi4g42997 5.0kb upstream 5.0kb upstream 7031 true Bd4: 46766938-46773968 Brachypodium distachyon
Bradi4g42997 5.0kb upstream 5.0kb upstream 5000 false Bd4: 46766938-46771937 Brachypodium distachyon
Bradi4g42997 5.0kb downstream 5.0kb downstream 7031 true Bd4: 46771938-46778968 Brachypodium distachyon
Bradi4g42997 5.0kb downstream 5.0kb downstream 5000 false Bd4: 46773969-46778968 Brachypodium distachyon
Bradi4g42997 10.0kb upstream 10.0kb upstream 12031 true Bd4: 46761938-46773968 Brachypodium distachyon
Bradi4g42997 10.0kb upstream 10.0kb upstream 10000 false Bd4: 46761938-46771937 Brachypodium distachyon
Bradi4g42997 10.0kb downstream 10.0kb downstream 12031 true Bd4: 46771938-46783968 Brachypodium distachyon
Bradi4g42997 10.0kb downstream 10.0kb downstream 10000 false Bd4: 46773969-46783968 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041128 5273 Angiosperm View MSA
124584467 5269 Grass View MSA
121309799 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.74        
cufflinks 1.577        
cufflinks 0.958        
cufflinks 0.657        
cufflinks 1.215        
cufflinks 1.068        
cufflinks 1.345        
cufflinks 0.372        
cufflinks 0.646        
cufflinks 1.411        
cufflinks 6.412       High
cufflinks 1.837        
cufflinks 0.817        
cufflinks 2.277        
cufflinks 0.652        
cufflinks 0.769        
cufflinks 0.905        
cufflinks 7.261       High
cufflinks 9.275       High
cufflinks 2.4        
cufflinks 0.026     Low Low
cufflinks 1.485        
cufflinks 0.456        
cufflinks 0.637        
cufflinks 0.603        
cufflinks 0.892        
cufflinks 1.979        
cufflinks 1.026        
cufflinks 0.904        
cufflinks 0.063     Low Low

0 Strain