Gene : Bradi3g11060 B. distachyon v3.1
Defline:  (1 of 2) 1.2.1.70 - Glutamyl-tRNA reductase Genomic Order:  1447
Name:  ? Bradi3g11060 Secondary Identifier:  ? PAC:32817324
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5188 Brachypodium distachyon pathologic  
Bdistachyon PWY-5918 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g11060 0.5kb upstream 0.5kb upstream 3987 true Bd3: 9458780-9462766 Brachypodium distachyon
Bradi3g11060 0.5kb upstream 0.5kb upstream 500 false Bd3: 9462267-9462766 Brachypodium distachyon
Bradi3g11060 0.5kb downstream 0.5kb downstream 3987 true Bd3: 9458280-9462266 Brachypodium distachyon
Bradi3g11060 0.5kb downstream 0.5kb downstream 500 false Bd3: 9458280-9458779 Brachypodium distachyon
Bradi3g11060 1.0kb upstream 1.0kb upstream 4487 true Bd3: 9458780-9463266 Brachypodium distachyon
Bradi3g11060 1.0kb upstream 1.0kb upstream 1000 false Bd3: 9462267-9463266 Brachypodium distachyon
Bradi3g11060 1.0kb downstream 1.0kb downstream 4487 true Bd3: 9457780-9462266 Brachypodium distachyon
Bradi3g11060 1.0kb downstream 1.0kb downstream 1000 false Bd3: 9457780-9458779 Brachypodium distachyon
Bradi3g11060 2.0kb upstream 2.0kb upstream 5487 true Bd3: 9458780-9464266 Brachypodium distachyon
Bradi3g11060 2.0kb upstream 2.0kb upstream 2000 false Bd3: 9462267-9464266 Brachypodium distachyon
Bradi3g11060 2.0kb downstream 2.0kb downstream 5487 true Bd3: 9456780-9462266 Brachypodium distachyon
Bradi3g11060 2.0kb downstream 2.0kb downstream 2000 false Bd3: 9456780-9458779 Brachypodium distachyon
Bradi3g11060 5.0kb upstream 5.0kb upstream 8487 true Bd3: 9458780-9467266 Brachypodium distachyon
Bradi3g11060 5.0kb upstream 5.0kb upstream 5000 false Bd3: 9462267-9467266 Brachypodium distachyon
Bradi3g11060 5.0kb downstream 5.0kb downstream 8487 true Bd3: 9453780-9462266 Brachypodium distachyon
Bradi3g11060 5.0kb downstream 5.0kb downstream 5000 false Bd3: 9453780-9458779 Brachypodium distachyon
Bradi3g11060 10.0kb upstream 10.0kb upstream 13487 true Bd3: 9458780-9472266 Brachypodium distachyon
Bradi3g11060 10.0kb upstream 10.0kb upstream 10000 false Bd3: 9462267-9472266 Brachypodium distachyon
Bradi3g11060 10.0kb downstream 10.0kb downstream 13487 true Bd3: 9448780-9462266 Brachypodium distachyon
Bradi3g11060 10.0kb downstream 10.0kb downstream 10000 false Bd3: 9448780-9458779 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587733 5269 Grass View MSA
122042343 5273 Angiosperm View MSA
121344593 5274 Embryophyte View MSA
123424931 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.856     High High
cufflinks 23.093     High  
cufflinks 12.28     High  
cufflinks 30.751     High  
cufflinks 34.07     High  
cufflinks 22.304     High  
cufflinks 16.483     High  
cufflinks 28.818     High  
cufflinks 20.218     High  
cufflinks 6.869       Low
cufflinks 17.397     High  
cufflinks 34.382     High  
cufflinks 24.806     High  
cufflinks 30.259     High  
cufflinks 81.55     High High
cufflinks 24.932     High  
cufflinks 27.239     High  
cufflinks 3.208       Low
cufflinks 8.435       Low
cufflinks 14.829     High  
cufflinks 7.285       Low
cufflinks 8.262       Low
cufflinks 33.189     High  
cufflinks 33.96     High  
cufflinks 27.461     High  
cufflinks 11.098     High  
cufflinks 28.605     High  
cufflinks 8.96        
cufflinks 8.48       Low
cufflinks 14.79     High  

0 Strain