Gene : Bradi3g11390 B. distachyon v3.1
Defline:  (1 of 1) PTHR24078//PTHR24078:SF301 - DNAJ HOMOLOG SUBFAMILY C MEMBER Genomic Order:  1488
Name:  ? Bradi3g11390 Secondary Identifier:  ? PAC:32817131
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g11390 0.5kb upstream 0.5kb upstream 9177 true Bd3: 9845407-9854583 Brachypodium distachyon
Bradi3g11390 0.5kb upstream 0.5kb upstream 500 false Bd3: 9854084-9854583 Brachypodium distachyon
Bradi3g11390 0.5kb downstream 0.5kb downstream 9177 true Bd3: 9844907-9854083 Brachypodium distachyon
Bradi3g11390 0.5kb downstream 0.5kb downstream 500 false Bd3: 9844907-9845406 Brachypodium distachyon
Bradi3g11390 1.0kb upstream 1.0kb upstream 9677 true Bd3: 9845407-9855083 Brachypodium distachyon
Bradi3g11390 1.0kb upstream 1.0kb upstream 1000 false Bd3: 9854084-9855083 Brachypodium distachyon
Bradi3g11390 1.0kb downstream 1.0kb downstream 9677 true Bd3: 9844407-9854083 Brachypodium distachyon
Bradi3g11390 1.0kb downstream 1.0kb downstream 1000 false Bd3: 9844407-9845406 Brachypodium distachyon
Bradi3g11390 2.0kb upstream 2.0kb upstream 10677 true Bd3: 9845407-9856083 Brachypodium distachyon
Bradi3g11390 2.0kb upstream 2.0kb upstream 2000 false Bd3: 9854084-9856083 Brachypodium distachyon
Bradi3g11390 2.0kb downstream 2.0kb downstream 10677 true Bd3: 9843407-9854083 Brachypodium distachyon
Bradi3g11390 2.0kb downstream 2.0kb downstream 2000 false Bd3: 9843407-9845406 Brachypodium distachyon
Bradi3g11390 5.0kb upstream 5.0kb upstream 13677 true Bd3: 9845407-9859083 Brachypodium distachyon
Bradi3g11390 5.0kb upstream 5.0kb upstream 5000 false Bd3: 9854084-9859083 Brachypodium distachyon
Bradi3g11390 5.0kb downstream 5.0kb downstream 13677 true Bd3: 9840407-9854083 Brachypodium distachyon
Bradi3g11390 5.0kb downstream 5.0kb downstream 5000 false Bd3: 9840407-9845406 Brachypodium distachyon
Bradi3g11390 10.0kb upstream 10.0kb upstream 18677 true Bd3: 9845407-9864083 Brachypodium distachyon
Bradi3g11390 10.0kb upstream 10.0kb upstream 10000 false Bd3: 9854084-9864083 Brachypodium distachyon
Bradi3g11390 10.0kb downstream 10.0kb downstream 18677 true Bd3: 9835407-9854083 Brachypodium distachyon
Bradi3g11390 10.0kb downstream 10.0kb downstream 10000 false Bd3: 9835407-9845406 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580540 5269 Grass View MSA
122043533 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121350390 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.279        
cufflinks 2.983        
cufflinks 3.1        
cufflinks 3.394        
cufflinks 3.448        
cufflinks 2.812        
cufflinks 2.608        
cufflinks 2.98        
cufflinks 2.729        
cufflinks 2.97        
cufflinks 1.224       Low
cufflinks 2.961        
cufflinks 0.937       Low
cufflinks 1.152       Low
cufflinks 3.349        
cufflinks 2.823        
cufflinks 4.162        
cufflinks 4.44       High
cufflinks 3.133        
cufflinks 1.701       Low
cufflinks 4.437       High
cufflinks 3.255        
cufflinks 3.028        
cufflinks 2.88        
cufflinks 2.956        
cufflinks 3.414        
cufflinks 1.309       Low
cufflinks 3.154        
cufflinks 3.113        
cufflinks 5.11       High

0 Strain