Gene : Bradi4g42050 B. distachyon v3.1
Defline:  (1 of 1) PTHR12081//PTHR12081:SF48 - TRANSCRIPTION FACTOR E2F // SUBFAMILY NOT NAMED Genomic Order:  5411
Name:  ? Bradi4g42050 Secondary Identifier:  ? PAC:32786381
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g42050 0.5kb upstream 0.5kb upstream 5576 true Bd4: 46074992-46080567 Brachypodium distachyon
Bradi4g42050 0.5kb upstream 0.5kb upstream 500 false Bd4: 46074992-46075491 Brachypodium distachyon
Bradi4g42050 0.5kb downstream 0.5kb downstream 5576 true Bd4: 46075492-46081067 Brachypodium distachyon
Bradi4g42050 0.5kb downstream 0.5kb downstream 500 false Bd4: 46080568-46081067 Brachypodium distachyon
Bradi4g42050 1.0kb upstream 1.0kb upstream 6076 true Bd4: 46074492-46080567 Brachypodium distachyon
Bradi4g42050 1.0kb upstream 1.0kb upstream 1000 false Bd4: 46074492-46075491 Brachypodium distachyon
Bradi4g42050 1.0kb downstream 1.0kb downstream 6076 true Bd4: 46075492-46081567 Brachypodium distachyon
Bradi4g42050 1.0kb downstream 1.0kb downstream 1000 false Bd4: 46080568-46081567 Brachypodium distachyon
Bradi4g42050 2.0kb upstream 2.0kb upstream 7076 true Bd4: 46073492-46080567 Brachypodium distachyon
Bradi4g42050 2.0kb upstream 2.0kb upstream 2000 false Bd4: 46073492-46075491 Brachypodium distachyon
Bradi4g42050 2.0kb downstream 2.0kb downstream 7076 true Bd4: 46075492-46082567 Brachypodium distachyon
Bradi4g42050 2.0kb downstream 2.0kb downstream 2000 false Bd4: 46080568-46082567 Brachypodium distachyon
Bradi4g42050 5.0kb upstream 5.0kb upstream 10076 true Bd4: 46070492-46080567 Brachypodium distachyon
Bradi4g42050 5.0kb upstream 5.0kb upstream 5000 false Bd4: 46070492-46075491 Brachypodium distachyon
Bradi4g42050 5.0kb downstream 5.0kb downstream 10076 true Bd4: 46075492-46085567 Brachypodium distachyon
Bradi4g42050 5.0kb downstream 5.0kb downstream 5000 false Bd4: 46080568-46085567 Brachypodium distachyon
Bradi4g42050 10.0kb upstream 10.0kb upstream 15076 true Bd4: 46065492-46080567 Brachypodium distachyon
Bradi4g42050 10.0kb upstream 10.0kb upstream 10000 false Bd4: 46065492-46075491 Brachypodium distachyon
Bradi4g42050 10.0kb downstream 10.0kb downstream 15076 true Bd4: 46075492-46090567 Brachypodium distachyon
Bradi4g42050 10.0kb downstream 10.0kb downstream 10000 false Bd4: 46080568-46090567 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571570 5269 Grass View MSA
122042305 5273 Angiosperm View MSA
121345510 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.965       High
cufflinks 0.646        
cufflinks 0.621        
cufflinks 0.631        
cufflinks 0.443        
cufflinks 0.556        
cufflinks 0.528        
cufflinks 0.964       High
cufflinks 0.696        
cufflinks 0.676        
cufflinks 0.404       Low
cufflinks 0.529        
cufflinks 0.362       Low
cufflinks 0.356       Low
cufflinks 0.801        
cufflinks 0.54        
cufflinks 0.574        
cufflinks 0.764        
cufflinks 0.847       High
cufflinks 0.327       Low
cufflinks 0.555        
cufflinks 0.914       High
cufflinks 0.779        
cufflinks 0.657        
cufflinks 0.548        
cufflinks 0.706        
cufflinks 0.604        
cufflinks 0.645        
cufflinks 0.732        
cufflinks 0.722        

0 Strain