Gene : Bradi3g12250 B. distachyon v3.1
Defline:  (1 of 1) PTHR10774//PTHR10774:SF77 - EXTENDED SYNAPTOTAGMIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1533
Name:  ? Bradi3g12250 Secondary Identifier:  ? PAC:32817295
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g12250 0.5kb upstream 0.5kb upstream 11588 true Bd3: 10963542-10975129 Brachypodium distachyon
Bradi3g12250 0.5kb upstream 0.5kb upstream 500 false Bd3: 10963542-10964041 Brachypodium distachyon
Bradi3g12250 0.5kb downstream 0.5kb downstream 11588 true Bd3: 10964042-10975629 Brachypodium distachyon
Bradi3g12250 0.5kb downstream 0.5kb downstream 500 false Bd3: 10975130-10975629 Brachypodium distachyon
Bradi3g12250 1.0kb upstream 1.0kb upstream 12088 true Bd3: 10963042-10975129 Brachypodium distachyon
Bradi3g12250 1.0kb upstream 1.0kb upstream 1000 false Bd3: 10963042-10964041 Brachypodium distachyon
Bradi3g12250 1.0kb downstream 1.0kb downstream 12088 true Bd3: 10964042-10976129 Brachypodium distachyon
Bradi3g12250 1.0kb downstream 1.0kb downstream 1000 false Bd3: 10975130-10976129 Brachypodium distachyon
Bradi3g12250 2.0kb upstream 2.0kb upstream 13088 true Bd3: 10962042-10975129 Brachypodium distachyon
Bradi3g12250 2.0kb upstream 2.0kb upstream 2000 false Bd3: 10962042-10964041 Brachypodium distachyon
Bradi3g12250 2.0kb downstream 2.0kb downstream 13088 true Bd3: 10964042-10977129 Brachypodium distachyon
Bradi3g12250 2.0kb downstream 2.0kb downstream 2000 false Bd3: 10975130-10977129 Brachypodium distachyon
Bradi3g12250 5.0kb upstream 5.0kb upstream 16088 true Bd3: 10959042-10975129 Brachypodium distachyon
Bradi3g12250 5.0kb upstream 5.0kb upstream 5000 false Bd3: 10959042-10964041 Brachypodium distachyon
Bradi3g12250 5.0kb downstream 5.0kb downstream 16088 true Bd3: 10964042-10980129 Brachypodium distachyon
Bradi3g12250 5.0kb downstream 5.0kb downstream 5000 false Bd3: 10975130-10980129 Brachypodium distachyon
Bradi3g12250 10.0kb upstream 10.0kb upstream 21088 true Bd3: 10954042-10975129 Brachypodium distachyon
Bradi3g12250 10.0kb upstream 10.0kb upstream 10000 false Bd3: 10954042-10964041 Brachypodium distachyon
Bradi3g12250 10.0kb downstream 10.0kb downstream 21088 true Bd3: 10964042-10985129 Brachypodium distachyon
Bradi3g12250 10.0kb downstream 10.0kb downstream 10000 false Bd3: 10975130-10985129 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587240 5269 Grass View MSA
122043926 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121346982 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.271        
cufflinks 5.467        
cufflinks 4.963        
cufflinks 5.35        
cufflinks 2.601        
cufflinks 4.921        
cufflinks 4.455        
cufflinks 3.43        
cufflinks 4.216        
cufflinks 2.528        
cufflinks 2.074       Low
cufflinks 4.823        
cufflinks 3.269        
cufflinks 2.075       Low
cufflinks 3.283        
cufflinks 4.608        
cufflinks 3.149        
cufflinks 4.685        
cufflinks 3.283        
cufflinks 0.574       Low
cufflinks 4.492        
cufflinks 4.032        
cufflinks 3.814        
cufflinks 4.951        
cufflinks 4.714        
cufflinks 4.366        
cufflinks 2.45        
cufflinks 3.689        
cufflinks 3.746        
cufflinks 6.551       High

0 Strain